From cab48e30255d927796b22d745f9e0c888b2acc30 Mon Sep 17 00:00:00 2001
From: gbayarri <genis.bayarri@irbbarcelona.org>
Date: Fri, 31 May 2024 15:18:25 +0200
Subject: [PATCH] Unifying workflow name

---
 README.md                                                | 2 +-
 binder/environment.yml                                   | 2 +-
 biobb_wf_md_setup/docs/source/readme.md                  | 2 +-
 biobb_wf_md_setup/docs/source/tutorial.md                | 2 +-
 biobb_wf_md_setup/html/biobb_MDsetup_tutorial.web.html   | 2 +-
 biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb | 2 +-
 conda_env/environment.yml                                | 2 +-
 7 files changed, 7 insertions(+), 7 deletions(-)

diff --git a/README.md b/README.md
index 3c4d019..5fd4685 100644
--- a/README.md
+++ b/README.md
@@ -34,7 +34,7 @@ This tutorial aims to illustrate the process of **setting up a simulation** syst
 git clone https://github.com/bioexcel/biobb_wf_md_setup.git
 cd biobb_wf_md_setup
 conda env create -f conda_env/environment.yml
-conda activate biobb_GMX_MDsetup_tutorial
+conda activate biobb_wf_md_setup
 jupyter-notebook biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb
 ```
 
diff --git a/binder/environment.yml b/binder/environment.yml
index d73febd..3897ad2 100644
--- a/binder/environment.yml
+++ b/binder/environment.yml
@@ -1,4 +1,4 @@
-name: biobb_GMX_MDsetup_tutorial
+name: biobb_wf_md_setup
 channels:
   - conda-forge
   - bioconda
diff --git a/biobb_wf_md_setup/docs/source/readme.md b/biobb_wf_md_setup/docs/source/readme.md
index 3c4d019..5fd4685 100644
--- a/biobb_wf_md_setup/docs/source/readme.md
+++ b/biobb_wf_md_setup/docs/source/readme.md
@@ -34,7 +34,7 @@ This tutorial aims to illustrate the process of **setting up a simulation** syst
 git clone https://github.com/bioexcel/biobb_wf_md_setup.git
 cd biobb_wf_md_setup
 conda env create -f conda_env/environment.yml
-conda activate biobb_GMX_MDsetup_tutorial
+conda activate biobb_wf_md_setup
 jupyter-notebook biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb
 ```
 
diff --git a/biobb_wf_md_setup/docs/source/tutorial.md b/biobb_wf_md_setup/docs/source/tutorial.md
index d5053df..d04ce59 100644
--- a/biobb_wf_md_setup/docs/source/tutorial.md
+++ b/biobb_wf_md_setup/docs/source/tutorial.md
@@ -26,7 +26,7 @@ This tutorial aims to illustrate the process of **setting up a simulation system
 git clone https://github.com/bioexcel/biobb_wf_md_setup.git
 cd biobb_wf_md_setup
 conda env create -f conda_env/environment.yml
-conda activate biobb_GMX_MDsetup_tutorial
+conda activate biobb_wf_md_setup
 jupyter-notebook biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb
 ```
 
diff --git a/biobb_wf_md_setup/html/biobb_MDsetup_tutorial.web.html b/biobb_wf_md_setup/html/biobb_MDsetup_tutorial.web.html
index 721e4ff..7869708 100644
--- a/biobb_wf_md_setup/html/biobb_MDsetup_tutorial.web.html
+++ b/biobb_wf_md_setup/html/biobb_MDsetup_tutorial.web.html
@@ -7535,7 +7535,7 @@ <h3 id="Auxiliary-libraries-used">Auxiliary libraries used<a class="anchor-link"
 <h3 id="Conda-Installation-and-Launch">Conda Installation and Launch<a class="anchor-link" href="#Conda-Installation-and-Launch">¶</a></h3><div class="highlight"><pre><span></span><span class="go">git clone https://github.com/bioexcel/biobb_wf_md_setup.git</span>
 <span class="go">cd biobb_wf_md_setup</span>
 <span class="go">conda env create -f conda_env/environment.yml</span>
-<span class="go">conda activate biobb_GMX_MDsetup_tutorial</span>
+<span class="go">conda activate biobb_wf_md_setup</span>
 <span class="go">jupyter-notebook biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb</span>
 </pre></div>
 <hr/>
diff --git a/biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb b/biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb
index cefe8ff..7d9facf 100644
--- a/biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb
+++ b/biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb
@@ -32,7 +32,7 @@
     "git clone https://github.com/bioexcel/biobb_wf_md_setup.git\n",
     "cd biobb_wf_md_setup\n",
     "conda env create -f conda_env/environment.yml\n",
-    "conda activate biobb_GMX_MDsetup_tutorial\n",
+    "conda activate biobb_wf_md_setup\n",
     "jupyter-notebook biobb_wf_md_setup/notebooks/biobb_MDsetup_tutorial.ipynb\n",
     "```\n",
     "\n",
diff --git a/conda_env/environment.yml b/conda_env/environment.yml
index c4de3a4..f32046c 100644
--- a/conda_env/environment.yml
+++ b/conda_env/environment.yml
@@ -1,4 +1,4 @@
-name: biobb_GMX_MDsetup_tutorial
+name: biobb_wf_md_setup
 channels:
   - conda-forge
   - bioconda