diff --git a/biobb_godmd/docs/source/command_line.md b/biobb_godmd/docs/source/command_line.md index 9965c72..8abad54 100644 --- a/biobb_godmd/docs/source/command_line.md +++ b/biobb_godmd/docs/source/command_line.md @@ -61,6 +61,7 @@ Config parameters for this building block: * **binary_path** (*string*): (discrete) Binary path.. * **remove_tmp** (*boolean*): (True) Remove temporal files.. * **restart** (*boolean*): (False) Do not execute if output files exist.. +* **sandbox_path** (*string*): (./) Parent path to the sandbox directory.. ### YAML #### [Common config file](https://github.com/bioexcel/biobb_godmd/blob/master/biobb_godmd/test/data/config/config_godmd_run.yml) ```python @@ -128,6 +129,7 @@ Config parameters for this building block: * **binary_path** (*string*): (water) Binary path.. * **remove_tmp** (*boolean*): (True) Remove temporal files.. * **restart** (*boolean*): (False) Do not execute if output files exist.. +* **sandbox_path** (*string*): (./) Parent path to the sandbox directory.. ### YAML #### [Common config file](https://github.com/bioexcel/biobb_godmd/blob/master/biobb_godmd/test/data/config/config_godmd_prep.yml) ```python diff --git a/biobb_godmd/json_schemas/godmd_prep.json b/biobb_godmd/json_schemas/godmd_prep.json index 6da6f14..194651d 100644 --- a/biobb_godmd/json_schemas/godmd_prep.json +++ b/biobb_godmd/json_schemas/godmd_prep.json @@ -136,6 +136,12 @@ "default": false, "wf_prop": true, "description": "Do not execute if output files exist." + }, + "sandbox_path": { + "type": "string", + "default": "./", + "wf_prop": true, + "description": "Parent path to the sandbox directory." } } } diff --git a/biobb_godmd/json_schemas/godmd_run.json b/biobb_godmd/json_schemas/godmd_run.json index 58b44ca..0fc8f13 100644 --- a/biobb_godmd/json_schemas/godmd_run.json +++ b/biobb_godmd/json_schemas/godmd_run.json @@ -269,6 +269,12 @@ "default": false, "wf_prop": true, "description": "Do not execute if output files exist." + }, + "sandbox_path": { + "type": "string", + "default": "./", + "wf_prop": true, + "description": "Parent path to the sandbox directory." } } }