From 7679a7a132336c5e3a8739e5a58f9838f73625bb Mon Sep 17 00:00:00 2001 From: Christopher Tomkins-Tinch Date: Mon, 27 Feb 2017 18:04:36 -0500 Subject: [PATCH] rebuild deeptools under conda-build 2 See: https://github.com/bioconda/bioconda-recipes/issues/3904 --- recipes/deeptools/2.3.5/build.sh | 3 +++ recipes/deeptools/2.3.5/meta.yaml | 44 +++++++++++++++++++++++++++++++ recipes/deeptools/2.3.6/build.sh | 3 +++ recipes/deeptools/2.3.6/meta.yaml | 44 +++++++++++++++++++++++++++++++ recipes/deeptools/2.4.1/build.sh | 3 +++ recipes/deeptools/2.4.1/meta.yaml | 44 +++++++++++++++++++++++++++++++ 6 files changed, 141 insertions(+) create mode 100644 recipes/deeptools/2.3.5/build.sh create mode 100644 recipes/deeptools/2.3.5/meta.yaml create mode 100644 recipes/deeptools/2.3.6/build.sh create mode 100644 recipes/deeptools/2.3.6/meta.yaml create mode 100644 recipes/deeptools/2.4.1/build.sh create mode 100644 recipes/deeptools/2.4.1/meta.yaml diff --git a/recipes/deeptools/2.3.5/build.sh b/recipes/deeptools/2.3.5/build.sh new file mode 100644 index 0000000000000..8e25a1455f914 --- /dev/null +++ b/recipes/deeptools/2.3.5/build.sh @@ -0,0 +1,3 @@ +#!/bin/bash + +$PYTHON setup.py install diff --git a/recipes/deeptools/2.3.5/meta.yaml b/recipes/deeptools/2.3.5/meta.yaml new file mode 100644 index 0000000000000..d912d2ae6b1fd --- /dev/null +++ b/recipes/deeptools/2.3.5/meta.yaml @@ -0,0 +1,44 @@ +{% set version = "2.3.5" %} + +package: + name: deeptools + version: '{{ version }}' + +source: + fn: deepTools-{{ version }}.tar.gz + url: https://pypi.python.org/packages/2e/21/a6836deaee7a48025182bf8588acb58716b7b216342479b6bf225f0b147b/deepTools-2.4.1.tar.gz + md5: 9ab5327fa198ed317fc20d2bea71196b + +build: + number: 1 + +requirements: + build: + - python + - setuptools + - numpy >=1.9.0 + - scipy >=0.17.0 + - matplotlib >=1.4.0 + - pysam >=0.8.2 + - py2bit >=0.2.0 + - gcc + run: + - python + - pybigwig >=0.2.3 + - numpy >=1.9.0 + - scipy >=0.17.0 + - matplotlib >=1.4.0 + - pysam >=0.8.2 + - py2bit >=0.2.0 + +test: + imports: + - deeptools + + commands: + - bamCompare --version + +about: + home: https://github.com/fidelram/deepTools + license: GPL3 + summary: A set of user-friendly tools for normalization and visualzation of deep-sequencing data diff --git a/recipes/deeptools/2.3.6/build.sh b/recipes/deeptools/2.3.6/build.sh new file mode 100644 index 0000000000000..8e25a1455f914 --- /dev/null +++ b/recipes/deeptools/2.3.6/build.sh @@ -0,0 +1,3 @@ +#!/bin/bash + +$PYTHON setup.py install diff --git a/recipes/deeptools/2.3.6/meta.yaml b/recipes/deeptools/2.3.6/meta.yaml new file mode 100644 index 0000000000000..c2deefb17b1ec --- /dev/null +++ b/recipes/deeptools/2.3.6/meta.yaml @@ -0,0 +1,44 @@ +{% set version = "2.3.6" %} + +package: + name: deeptools + version: '{{ version }}' + +source: + fn: deepTools-{{ version }}.tar.gz + url: https://pypi.python.org/packages/92/54/5de11d1c2c2e0b4dd4afb51f757b95550f0b97fb6566686f27d9e50b0260/deepTools-{{ version }}.tar.gz + md5: 910c61ae21776effd88a067fcdaeee55 + +build: + number: 1 + +requirements: + build: + - python + - setuptools + - numpy >=1.9.0 + - scipy >=0.17.0 + - matplotlib >=1.4.0 + - pysam >=0.8.2 + - py2bit >=0.2.0 + - gcc + run: + - python + - pybigwig >=0.2.3 + - numpy >=1.9.0 + - scipy >=0.17.0 + - matplotlib >=1.4.0 + - pysam >=0.8.2 + - py2bit >=0.2.0 + +test: + imports: + - deeptools + + commands: + - bamCompare --version + +about: + home: https://github.com/fidelram/deepTools + license: GPL3 + summary: A set of user-friendly tools for normalization and visualzation of deep-sequencing data diff --git a/recipes/deeptools/2.4.1/build.sh b/recipes/deeptools/2.4.1/build.sh new file mode 100644 index 0000000000000..8e25a1455f914 --- /dev/null +++ b/recipes/deeptools/2.4.1/build.sh @@ -0,0 +1,3 @@ +#!/bin/bash + +$PYTHON setup.py install diff --git a/recipes/deeptools/2.4.1/meta.yaml b/recipes/deeptools/2.4.1/meta.yaml new file mode 100644 index 0000000000000..cf43dc05b61dc --- /dev/null +++ b/recipes/deeptools/2.4.1/meta.yaml @@ -0,0 +1,44 @@ +{% set version = "2.4.1" %} + +package: + name: deeptools + version: '{{ version }}' + +source: + fn: deepTools-{{ version }}.tar.gz + url: https://pypi.python.org/packages/92/54/5de11d1c2c2e0b4dd4afb51f757b95550f0b97fb6566686f27d9e50b0260/deepTools-{{ version }}.tar.gz + md5: 910c61ae21776effd88a067fcdaeee55 + +build: + number: 1 + +requirements: + build: + - python + - setuptools + - numpy >=1.9.0 + - scipy >=0.17.0 + - matplotlib >=1.4.0 + - pysam >=0.8.2 + - py2bit >=0.2.0 + - gcc + run: + - python + - pybigwig >=0.2.3 + - numpy >=1.9.0 + - scipy >=0.17.0 + - matplotlib >=1.4.0 + - pysam >=0.8.2 + - py2bit >=0.2.0 + +test: + imports: + - deeptools + + commands: + - bamCompare --version + +about: + home: https://github.com/fidelram/deepTools + license: GPL3 + summary: A set of user-friendly tools for normalization and visualzation of deep-sequencing data