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Makefile
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# This file is part of libDAI - http://www.libdai.org/
#
# Copyright (c) 2006-2011, The libDAI authors. All rights reserved.
#
# Use of this source code is governed by a BSD-style license that can be found in the LICENSE file.
# Load the platform independent build configuration file
include Makefile.ALL
# Load the local configuration from Makefile.conf
include Makefile.conf
# Set version and date
DAI_VERSION="git HEAD"
DAI_DATE="September 17, 2012 - or later"
# Directories of libDAI sources
# Location of libDAI headers
INC=include/dai
# Location of libDAI source files
SRC=src
# Destination directory of libDAI library
LIB=lib
# Set final compiler flags
ifdef DEBUG
CCFLAGS:=$(CCFLAGS) $(CCDEBUGFLAGS)
else
CCFLAGS:=$(CCFLAGS) $(CCNODEBUGFLAGS)
endif
# Define build targets
TARGETS:=lib tests utils examples
ifdef WITH_MATLAB
TARGETS:=$(TARGETS) matlabs
endif
TARGETS:=$(TARGETS) unittests testregression testem
ifdef WITH_DOC
TARGETS:=$(TARGETS) doc
endif
# Define conditional build targets
NAMES:=graph dag bipgraph varset daialg alldai clustergraph factor factorgraph properties regiongraph cobwebgraph util weightedgraph exceptions exactinf evidence emalg io
NAMES:=$(NAMES) bp fbp trwbp mf hak lc treeep jtree mr gibbs bbp cbp bp_dual decmap glc
# Define standard libDAI header dependencies, source file names and object file names
HEADERS=$(foreach name,graph dag bipgraph index var factor varset smallset prob daialg properties alldai enum exceptions util,$(INC)/$(name).h)
SOURCES:=$(foreach name,$(NAMES),$(SRC)/$(name).cpp)
OBJECTS:=$(foreach name,$(NAMES),$(name)$(OE))
# Setup final command for C++ compiler
ifneq ($(OS),WINDOWS)
CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS) $(CCLIB)
else
CC:=$(CC) $(CCINC) $(CCFLAGS) $(WITHFLAGS)
LIBS:=$(LIBS) $(CCLIB)
endif
# Setup final command for MEX
ifdef NEW_MATLAB
MEXFLAGS:=$(MEXFLAGS) -largeArrayDims
else
MEXFLAGS:=$(MEXFLAGS) -DSMALLMEM
endif
MEX:=$(MEX) $(MEXINC) $(MEXFLAGS) $(WITHFLAGS) $(MEXLIBS) $(MEXLIB)
# META TARGETS
###############
all : $(TARGETS)
@echo
@echo libDAI built successfully!
EXAMPLES=$(foreach name,example example_bipgraph example_varset example_permute example_sprinkler example_sprinkler_em,examples/$(name)$(EE))
EXAMPLES:=$(EXAMPLES) examples/example_sprinkler_gibbs$(EE)
ifdef WITH_CIMG
EXAMPLES:=$(EXAMPLES) examples/example_imagesegmentation$(EE)
endif
examples : $(EXAMPLES)
matlabs : matlab/dai$(ME) matlab/dai_readfg$(ME) matlab/dai_writefg$(ME) matlab/dai_potstrength$(ME) matlab/dai_jtree$(ME)
unittests : tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/dag_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
@echo 'Running unit tests...'
@echo
tests/unit/var_test$(EE)
tests/unit/smallset_test$(EE)
tests/unit/varset_test$(EE)
tests/unit/graph_test$(EE)
tests/unit/dag_test$(EE)
tests/unit/bipgraph_test$(EE)
tests/unit/weightedgraph_test$(EE)
tests/unit/enum_test$(EE)
tests/unit/util_test$(EE)
tests/unit/exceptions_test$(EE)
tests/unit/properties_test$(EE)
tests/unit/index_test$(EE)
tests/unit/prob_test$(EE)
tests/unit/factor_test$(EE)
tests/unit/factorgraph_test$(EE)
tests/unit/clustergraph_test$(EE)
tests/unit/regiongraph_test$(EE)
tests/unit/daialg_test$(EE)
tests/unit/alldai_test$(EE)
@echo
@echo 'All unit tests completed successfully!'
@echo
tests : tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE) $(unittests)
utils : utils/createfg$(EE) utils/fg2dot$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
lib: $(LIB)/libdai$(LE) $(LIB)/libdai$(SLE)
# OBJECTS
##########
%$(OE) : $(SRC)/%.cpp $(INC)/%.h $(HEADERS)
$(CC) -c $<
bbp$(OE) : $(SRC)/bbp.cpp $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
$(CC) -c $<
cbp$(OE) : $(SRC)/cbp.cpp $(INC)/cbp.h $(INC)/bbp.h $(INC)/bp_dual.h $(HEADERS)
$(CC) -c $<
hak$(OE) : $(SRC)/hak.cpp $(INC)/hak.h $(HEADERS) $(INC)/regiongraph.h
$(CC) -c $<
jtree$(OE) : $(SRC)/jtree.cpp $(INC)/jtree.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h
$(CC) -c $<
treeep$(OE) : $(SRC)/treeep.cpp $(INC)/treeep.h $(HEADERS) $(INC)/weightedgraph.h $(INC)/clustergraph.h $(INC)/regiongraph.h $(INC)/jtree.h
$(CC) -c $<
emalg$(OE) : $(SRC)/emalg.cpp $(INC)/emalg.h $(INC)/evidence.h $(HEADERS)
$(CC) -c $<
decmap$(OE) : $(SRC)/decmap.cpp $(INC)/decmap.h $(HEADERS)
$(CC) -c $<
glc$(OE) : $(SRC)/glc.cpp $(INC)/glc.h $(HEADERS) $(INC)/cobwebgraph.h
$(CC) -c $<
# EXAMPLES
###########
examples/%$(EE) : examples/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS)
examples/example_sprinkler_gibbs$(EE) : examples/example_sprinkler_gibbs.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS)
examples/example_imagesegmentation$(EE) : examples/example_imagesegmentation.cpp $(HEADERS) $(LIB)/libdai$(LE)
ifdef NEW_CIMG
$(CC) -DNEW_CIMG $(CIMGINC) $(CCO)$@ $< $(LIBS) $(CIMGLIBS)
else
$(CC) $(CIMGINC) $(CCO)$@ $< $(LIBS) $(CIMGLIBS)
endif
# UNIT TESTS
#############
tests/unit/%$(EE) : tests/unit/%.cpp $(HEADERS) $(LIB)/libdai$(LE)
ifneq ($(OS),WINDOWS)
$(CC) -DBOOST_TEST_DYN_LINK $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF)
else
$(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_UTF) /SUBSYSTEM:CONSOLE
endif
# TESTS
########
tests/testdai$(EE) : tests/testdai.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
tests/testem/testem$(EE) : tests/testem/testem.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
tests/testbbp$(EE) : tests/testbbp.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS)
# MATLAB INTERFACE
###################
matlab/dai$(ME) : $(SRC)/matlab/dai.cpp $(HEADERS) $(SOURCES) $(SRC)/matlab/matlab.cpp
$(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SOURCES)
matlab/dai_readfg$(ME) : $(SRC)/matlab/dai_readfg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
$(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
matlab/dai_writefg$(ME) : $(SRC)/matlab/dai_writefg.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
$(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/factorgraph.cpp $(SRC)/exceptions.cpp $(SRC)/bipgraph.cpp $(SRC)/graph.cpp $(SRC)/factor.cpp $(SRC)/util.cpp
matlab/dai_potstrength$(ME) : $(SRC)/matlab/dai_potstrength.cpp $(HEADERS) $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
$(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SRC)/exceptions.cpp
matlab/dai_jtree$(ME) : $(SRC)/matlab/dai_jtree.cpp $(HEADERS) $(SOURCES) $(SRC)/matlab/matlab.cpp
$(MEX) -output $@ $< $(SRC)/matlab/matlab.cpp $(SOURCES)
# UTILS
########
utils/createfg$(EE) : utils/createfg.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS) $(BOOSTLIBS_PO)
utils/fg2dot$(EE) : utils/fg2dot.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS)
utils/fginfo$(EE) : utils/fginfo.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS)
utils/uai2fg$(EE) : utils/uai2fg.cpp $(HEADERS) $(LIB)/libdai$(LE)
$(CC) $(CCO)$@ $< $(LIBS)
# LIBRARY
##########
$(LIB)/libdai$(SLE) : $(OBJECTS)
-mkdir -p $(LIB)
$(CC) -shared -o libdai$(SLE) $(OBJECTS)
mv libdai$(SLE) $(LIB)/libdai$(SLE)
ifneq ($(OS),WINDOWS)
$(LIB)/libdai$(LE) : $(OBJECTS)
-mkdir -p $(LIB)
ar rcus $(LIB)/libdai$(LE) $(OBJECTS)
else
$(LIB)/libdai$(LE) : $(OBJECTS)
-mkdir lib
lib /out:$(LIB)/libdai$(LE) $(OBJECTS)
endif
# REGRESSION TESTS
###################
testregression : tests/testdai$(EE)
@echo Starting regression test...this can take a minute or so!
ifneq ($(OS),WINDOWS)
cd tests && ./testregression && cd ..
else
cd tests && testregression.bat && cd ..
endif
testem : tests/testem/testem$(EE)
@echo Starting EM tests
ifneq ($(OS),WINDOWS)
cd tests/testem && ./runtests && cd ../..
else
cd tests\testem && runtests && cd ..\..
endif
# DOCUMENTATION
################
doc : $(INC)/*.h $(SRC)/*.cpp examples/*.cpp doxygen.conf
doxygen doxygen.conf
README : doc scripts/makeREADME Makefile
DAI_VERSION=$(DAI_VERSION) DAI_DATE=$(DAI_DATE) scripts/makeREADME
TAGS :
etags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
ctags src/*.cpp include/dai/*.h tests/*.cpp utils/*.cpp
# CLEAN
########
.PHONY : clean
ifneq ($(OS),WINDOWS)
clean :
-rm $(OBJECTS)
-rm matlab/*$(ME)
-rm examples/example$(EE) examples/example_bipgraph$(EE) examples/example_varset$(EE) examples/example_permute$(EE) examples/example_sprinkler$(EE) examples/example_sprinkler_gibbs$(EE) examples/example_sprinkler_em$(EE) examples/example_imagesegmentation$(EE)
-rm tests/testdai$(EE) tests/testem/testem$(EE) tests/testbbp$(EE)
-rm tests/unit/var_test$(EE) tests/unit/smallset_test$(EE) tests/unit/varset_test$(EE) tests/unit/graph_test$(EE) tests/unit/dag_test$(EE) tests/unit/bipgraph_test$(EE) tests/unit/weightedgraph_test$(EE) tests/unit/enum_test$(EE) tests/unit/util_test$(EE) tests/unit/exceptions_test$(EE) tests/unit/properties_test$(EE) tests/unit/index_test$(EE) tests/unit/prob_test$(EE) tests/unit/factor_test$(EE) tests/unit/factorgraph_test$(EE) tests/unit/clustergraph_test$(EE) tests/unit/regiongraph_test$(EE) tests/unit/daialg_test$(EE) tests/unit/alldai_test$(EE)
-rm factorgraph_test.fg alldai_test.aliases
-rm utils/fg2dot$(EE) utils/createfg$(EE) utils/fginfo$(EE) utils/uai2fg$(EE)
-rm -R doc
-rm -R lib
else
clean :
-del *.obj
-del *.ilk
-del *.pdb
-del matlab\*$(ME)
-del examples\*$(EE)
-del examples\*$(EE).manifest
-del examples\*.ilk
-del examples\*.pdb
-del tests\*$(EE)
-del tests\*$(EE).manifest
-del tests\*.pdb
-del tests\*.ilk
-del tests\testem\*$(EE)
-del tests\testem\*$(EE).manifest
-del tests\testem\*.pdb
-del tests\testem\*.ilk
-del utils\*$(EE)
-del utils\*$(EE).manifest
-del utils\*.pdb
-del utils\*.ilk
-del tests\unit\*_test$(EE)
-del tests\unit\*_test$(EE).manifest
-del tests\unit\*_test.pdb
-del tests\unit\*_test.ilk
-del factorgraph_test.fg
-del alldai_test.aliases
-del $(LIB)\libdai$(LE)
-rmdir lib
endif