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Generate partitioned data #30

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tomwhite opened this issue Apr 16, 2015 · 3 comments
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Generate partitioned data #30

tomwhite opened this issue Apr 16, 2015 · 3 comments

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@tomwhite
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This is called locuspart in the spec.
@tomwhite
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PR at #31.

Not ready for commit yet as it depends on bigdatagenomics/adam#651, which itself has some dependencies on Kite changes.

@tomwhite tomwhite mentioned this issue Apr 17, 2015
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@tomwhite
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I updated #33 to use a new partitioning job (from https://github.com/tomwhite/adam-partitioning; see bigdatagenomics/adam#651 for discussion of the Spark-based one).

This is not quite ready as the number of partitions should be set based on the cluster size.

@tomwhite tomwhite mentioned this issue Apr 22, 2015
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@laserson
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Closing for cleanup/refactor. Perhaps taken care of by kite/Hive once we're on a Director cluster.

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@tomwhite @laserson