Skip to content

Commit c7673e5

Browse files
committed
[DATALAD RUNCMD] fix bids uri
=== Do not change lines below === { "chain": [], "cmd": "python tools/update_intended_for.py", "exit": 0, "extra_inputs": [], "inputs": [], "outputs": [], "pwd": "." } ^^^ Do not change lines above ^^^
1 parent 1de9f6c commit c7673e5

File tree

84 files changed

+2455
-2159
lines changed

Some content is hidden

Large Commits have some content hidden by default. Use the searchbox below for content that may be hidden.

84 files changed

+2455
-2159
lines changed
Lines changed: 42 additions & 19 deletions
Original file line numberDiff line numberDiff line change
@@ -1,19 +1,42 @@
1-
{"Manufacturer":"Philips",
2-
"ManufacturersModelName":"Achieva",
3-
"SoftwareVersions":"5.1.7_5.1.7.2",
4-
"MagneticFieldStrength":3,
5-
"ReceiveCoilName":"MULTI_COIL",
6-
"MRAcquisitionType":"2D",
7-
"PulseSequenceType":"EPI",
8-
"ScanningSequence":"GR",
9-
"SequenceVariant":"SK",
10-
"ScanOptions":"FS",
11-
"PulseSequenceDetails":"Philips 2D epi pcasl product",
12-
"PartialFourier":0.421875,
13-
"PhaseEncodingDirection":"j",
14-
"TotalReadoutTime":0.02198740305218437,
15-
"EchoTime":0.015001,
16-
"SliceTiming":[0,0.0385,0.077,0.1155,0.154,0.1925,0.231,0.2695,0.308,0.3465,0.385,0.4235,0.462,0.5004999999999999,0.539,0.5775,0.616,0.6545,0.6929999999999999,0.7315],
17-
"FlipAngle":90,
18-
"RepetitionTimePreparation":9,
19-
"IntendedFor":"perf/sub-Sub103_asl.nii.gz"}
1+
{
2+
"Manufacturer": "Philips",
3+
"ManufacturersModelName": "Achieva",
4+
"SoftwareVersions": "5.1.7_5.1.7.2",
5+
"MagneticFieldStrength": 3,
6+
"ReceiveCoilName": "MULTI_COIL",
7+
"MRAcquisitionType": "2D",
8+
"PulseSequenceType": "EPI",
9+
"ScanningSequence": "GR",
10+
"SequenceVariant": "SK",
11+
"ScanOptions": "FS",
12+
"PulseSequenceDetails": "Philips 2D epi pcasl product",
13+
"PartialFourier": 0.421875,
14+
"PhaseEncodingDirection": "j",
15+
"TotalReadoutTime": 0.02198740305218437,
16+
"EchoTime": 0.015001,
17+
"SliceTiming": [
18+
0,
19+
0.0385,
20+
0.077,
21+
0.1155,
22+
0.154,
23+
0.1925,
24+
0.231,
25+
0.2695,
26+
0.308,
27+
0.3465,
28+
0.385,
29+
0.4235,
30+
0.462,
31+
0.5005,
32+
0.539,
33+
0.5775,
34+
0.616,
35+
0.6545,
36+
0.693,
37+
0.7315
38+
],
39+
"FlipAngle": 90,
40+
"RepetitionTimePreparation": 9,
41+
"IntendedFor": "bids::sub-Sub103/perf/sub-Sub103_asl.nii.gz"
42+
}
Lines changed: 29 additions & 23 deletions
Original file line numberDiff line numberDiff line change
@@ -1,23 +1,29 @@
1-
{"Manufacturer":"Siemens",
2-
"ManufacturersModelName":"TrioTim",
3-
"SoftwareVersions":"N4_VB17A_LATEST_20090307",
4-
"MagneticFieldStrength":3,
5-
"ReceiveCoilName":"32Ch_Head",
6-
"ReceiveCoilActiveElements":"C:HEA;HEP",
7-
"MRAcquisitionType":"3D",
8-
"PulseSequenceType":"3Dgrase",
9-
"ScanningSequence":"RM",
10-
"SequenceVariant":"SK",
11-
"ScanOptions":"SAT1_FS",
12-
"SequenceName":"grs3d3d1_1152t0",
13-
"PulseSequenceDetails":"Bremen sequence: fme_ASL_Collection_002A",
14-
"PartialFourier":1,
15-
"PhaseEncodingDirection":"j-",
16-
"EffectiveEchoSpacing":0.00052,
17-
"TotalReadoutTime":0.0104,
18-
"EchoTime":0.01614,
19-
"DwellTime":3.4e-06,
20-
"FlipAngle":180,
21-
"RepetitionTimePreparation":6,
22-
"IntendedFor":"perf/sub-Sub1_asl.nii.gz",
23-
"AcquisitionVoxelsize":[2,2,5]}
1+
{
2+
"Manufacturer": "Siemens",
3+
"ManufacturersModelName": "TrioTim",
4+
"SoftwareVersions": "N4_VB17A_LATEST_20090307",
5+
"MagneticFieldStrength": 3,
6+
"ReceiveCoilName": "32Ch_Head",
7+
"ReceiveCoilActiveElements": "C:HEA;HEP",
8+
"MRAcquisitionType": "3D",
9+
"PulseSequenceType": "3Dgrase",
10+
"ScanningSequence": "RM",
11+
"SequenceVariant": "SK",
12+
"ScanOptions": "SAT1_FS",
13+
"SequenceName": "grs3d3d1_1152t0",
14+
"PulseSequenceDetails": "Bremen sequence: fme_ASL_Collection_002A",
15+
"PartialFourier": 1,
16+
"PhaseEncodingDirection": "j-",
17+
"EffectiveEchoSpacing": 0.00052,
18+
"TotalReadoutTime": 0.0104,
19+
"EchoTime": 0.01614,
20+
"DwellTime": 3.4e-06,
21+
"FlipAngle": 180,
22+
"RepetitionTimePreparation": 6,
23+
"IntendedFor": "bids::sub-Sub1/perf/sub-Sub1_asl.nii.gz",
24+
"AcquisitionVoxelsize": [
25+
2,
26+
2,
27+
5
28+
]
29+
}
Lines changed: 39 additions & 12 deletions
Original file line numberDiff line numberDiff line change
@@ -1,12 +1,39 @@
1-
{"Manufacturer":"Siemens",
2-
"ManufacturersModelName":"TrioTim",
3-
"MagneticFieldStrength":3,
4-
"MRAcquisitionType":"2D",
5-
"PulseSequenceType":"EPI",
6-
"PhaseEncodingDirection":"j",
7-
"TotalReadoutTime":0.06,
8-
"EchoTime":0.014,
9-
"SliceTiming":[0,0.0452,0.0904,0.1356,0.1808,0.226,0.2712,0.3164,0.3616,0.4068,0.452,0.4972,0.5424,0.5876,0.6328,0.678,0.7232,0.7684,0.8136,0.8588,0.904,0.9492,0.9944,1.0396],
10-
"FlipAngle":90,
11-
"RepetitionTimePreparation":4.8,
12-
"IntendedFor":"perf/sub-Sub1_m0scan.nii.gz"}
1+
{
2+
"Manufacturer": "Siemens",
3+
"ManufacturersModelName": "TrioTim",
4+
"MagneticFieldStrength": 3,
5+
"MRAcquisitionType": "2D",
6+
"PulseSequenceType": "EPI",
7+
"PhaseEncodingDirection": "j",
8+
"TotalReadoutTime": 0.06,
9+
"EchoTime": 0.014,
10+
"SliceTiming": [
11+
0,
12+
0.0452,
13+
0.0904,
14+
0.1356,
15+
0.1808,
16+
0.226,
17+
0.2712,
18+
0.3164,
19+
0.3616,
20+
0.4068,
21+
0.452,
22+
0.4972,
23+
0.5424,
24+
0.5876,
25+
0.6328,
26+
0.678,
27+
0.7232,
28+
0.7684,
29+
0.8136,
30+
0.8588,
31+
0.904,
32+
0.9492,
33+
0.9944,
34+
1.0396
35+
],
36+
"FlipAngle": 90,
37+
"RepetitionTimePreparation": 4.8,
38+
"IntendedFor": "bids::sub-Sub1/perf/sub-Sub1_m0scan.nii.gz"
39+
}
Lines changed: 39 additions & 12 deletions
Original file line numberDiff line numberDiff line change
@@ -1,12 +1,39 @@
1-
{"Manufacturer":"Siemens",
2-
"ManufacturersModelName":"TrioTim",
3-
"MagneticFieldStrength":3,
4-
"MRAcquisitionType":"2D",
5-
"PulseSequenceType":"EPI",
6-
"PhaseEncodingDirection":"j-",
7-
"TotalReadoutTime":0.06,
8-
"EchoTime":0.014,
9-
"SliceTiming":[0,0.0452,0.0904,0.1356,0.1808,0.226,0.2712,0.3164,0.3616,0.4068,0.452,0.4972,0.5424,0.5876,0.6328,0.678,0.7232,0.7684,0.8136,0.8588,0.904,0.9492,0.9944,1.0396],
10-
"FlipAngle":90,
11-
"RepetitionTimePreparation":4.8,
12-
"IntendedFor":"perf/sub-Sub1_asl.nii.gz"}
1+
{
2+
"Manufacturer": "Siemens",
3+
"ManufacturersModelName": "TrioTim",
4+
"MagneticFieldStrength": 3,
5+
"MRAcquisitionType": "2D",
6+
"PulseSequenceType": "EPI",
7+
"PhaseEncodingDirection": "j-",
8+
"TotalReadoutTime": 0.06,
9+
"EchoTime": 0.014,
10+
"SliceTiming": [
11+
0,
12+
0.0452,
13+
0.0904,
14+
0.1356,
15+
0.1808,
16+
0.226,
17+
0.2712,
18+
0.3164,
19+
0.3616,
20+
0.4068,
21+
0.452,
22+
0.4972,
23+
0.5424,
24+
0.5876,
25+
0.6328,
26+
0.678,
27+
0.7232,
28+
0.7684,
29+
0.8136,
30+
0.8588,
31+
0.904,
32+
0.9492,
33+
0.9944,
34+
1.0396
35+
],
36+
"FlipAngle": 90,
37+
"RepetitionTimePreparation": 4.8,
38+
"IntendedFor": "bids::sub-Sub1/perf/sub-Sub1_asl.nii.gz"
39+
}
Lines changed: 21 additions & 19 deletions
Original file line numberDiff line numberDiff line change
@@ -1,19 +1,21 @@
1-
{"Manufacturer":"Siemens",
2-
"ManufacturersModelName":"Prisma_fit",
3-
"SoftwareVersions":"syngo_MR_E11",
4-
"MagneticFieldStrength":3,
5-
"ReceiveCoilName":"HeadNeck_64",
6-
"ReceiveCoilActiveElements":"HC1-6",
7-
"MRAcquisitionType":"3D",
8-
"PulseSequenceType":"3Dgrase",
9-
"ScanningSequence":"EP",
10-
"SequenceVariant":"SK",
11-
"ScanOptions":"SAT1_FS",
12-
"SequenceName":"tg818I3d1_6720",
13-
"PulseSequenceDetails":"Siemens 3D GRASE product sequence (WIP): tgse_csl_818",
14-
"PartialFourier":1,
15-
"EchoTime":0.01328,
16-
"DwellTime":3.2e-06,
17-
"FlipAngle":130,
18-
"RepetitionTimePreparation":4.95,
19-
"IntendedFor":"perf/sub-Sub103_asl.nii.gz"}
1+
{
2+
"Manufacturer": "Siemens",
3+
"ManufacturersModelName": "Prisma_fit",
4+
"SoftwareVersions": "syngo_MR_E11",
5+
"MagneticFieldStrength": 3,
6+
"ReceiveCoilName": "HeadNeck_64",
7+
"ReceiveCoilActiveElements": "HC1-6",
8+
"MRAcquisitionType": "3D",
9+
"PulseSequenceType": "3Dgrase",
10+
"ScanningSequence": "EP",
11+
"SequenceVariant": "SK",
12+
"ScanOptions": "SAT1_FS",
13+
"SequenceName": "tg818I3d1_6720",
14+
"PulseSequenceDetails": "Siemens 3D GRASE product sequence (WIP): tgse_csl_818",
15+
"PartialFourier": 1,
16+
"EchoTime": 0.01328,
17+
"DwellTime": 3.2e-06,
18+
"FlipAngle": 130,
19+
"RepetitionTimePreparation": 4.95,
20+
"IntendedFor": "bids::sub-Sub103/perf/sub-Sub103_asl.nii.gz"
21+
}
Lines changed: 17 additions & 17 deletions
Original file line numberDiff line numberDiff line change
@@ -1,17 +1,17 @@
1-
{
2-
"RepetitionTime": 0.4,
3-
"EchoTime1": 0.00519,
4-
"EchoTime2": 0.00765,
5-
"FlipAngle": 60,
6-
"IntendedFor": [
7-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-01_bold.nii.gz",
8-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-02_bold.nii.gz",
9-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-03_bold.nii.gz",
10-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-04_bold.nii.gz",
11-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-05_bold.nii.gz",
12-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-06_bold.nii.gz",
13-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-07_bold.nii.gz",
14-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-08_bold.nii.gz",
15-
"ses-mri/func/sub-01_ses-mri_task-facerecognition_run-09_bold.nii.gz"
16-
]
17-
}
1+
{
2+
"RepetitionTime": 0.4,
3+
"EchoTime1": 0.00519,
4+
"EchoTime2": 0.00765,
5+
"FlipAngle": 60,
6+
"IntendedFor": [
7+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-01_bold.nii.gz",
8+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-02_bold.nii.gz",
9+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-03_bold.nii.gz",
10+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-04_bold.nii.gz",
11+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-05_bold.nii.gz",
12+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-06_bold.nii.gz",
13+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-07_bold.nii.gz",
14+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-08_bold.nii.gz",
15+
"bids::sub-01/ses-mri/func/sub-01_ses-mri_task-facerecognition_run-09_bold.nii.gz"
16+
]
17+
}
Lines changed: 17 additions & 17 deletions
Original file line numberDiff line numberDiff line change
@@ -1,17 +1,17 @@
1-
{
2-
"RepetitionTime": 0.4,
3-
"EchoTime1": 0.00519,
4-
"EchoTime2": 0.00765,
5-
"FlipAngle": 60,
6-
"IntendedFor": [
7-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-01_bold.nii.gz",
8-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-02_bold.nii.gz",
9-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-03_bold.nii.gz",
10-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-04_bold.nii.gz",
11-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-05_bold.nii.gz",
12-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-06_bold.nii.gz",
13-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-07_bold.nii.gz",
14-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-08_bold.nii.gz",
15-
"ses-mri/func/sub-02_ses-mri_task-facerecognition_run-09_bold.nii.gz"
16-
]
17-
}
1+
{
2+
"RepetitionTime": 0.4,
3+
"EchoTime1": 0.00519,
4+
"EchoTime2": 0.00765,
5+
"FlipAngle": 60,
6+
"IntendedFor": [
7+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-01_bold.nii.gz",
8+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-02_bold.nii.gz",
9+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-03_bold.nii.gz",
10+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-04_bold.nii.gz",
11+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-05_bold.nii.gz",
12+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-06_bold.nii.gz",
13+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-07_bold.nii.gz",
14+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-08_bold.nii.gz",
15+
"bids::sub-02/ses-mri/func/sub-02_ses-mri_task-facerecognition_run-09_bold.nii.gz"
16+
]
17+
}
Lines changed: 17 additions & 17 deletions
Original file line numberDiff line numberDiff line change
@@ -1,17 +1,17 @@
1-
{
2-
"RepetitionTime": 0.4,
3-
"EchoTime1": 0.00519,
4-
"EchoTime2": 0.00765,
5-
"FlipAngle": 60,
6-
"IntendedFor": [
7-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-01_bold.nii.gz",
8-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-02_bold.nii.gz",
9-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-03_bold.nii.gz",
10-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-04_bold.nii.gz",
11-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-05_bold.nii.gz",
12-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-06_bold.nii.gz",
13-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-07_bold.nii.gz",
14-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-08_bold.nii.gz",
15-
"ses-mri/func/sub-03_ses-mri_task-facerecognition_run-09_bold.nii.gz"
16-
]
17-
}
1+
{
2+
"RepetitionTime": 0.4,
3+
"EchoTime1": 0.00519,
4+
"EchoTime2": 0.00765,
5+
"FlipAngle": 60,
6+
"IntendedFor": [
7+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-01_bold.nii.gz",
8+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-02_bold.nii.gz",
9+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-03_bold.nii.gz",
10+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-04_bold.nii.gz",
11+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-05_bold.nii.gz",
12+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-06_bold.nii.gz",
13+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-07_bold.nii.gz",
14+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-08_bold.nii.gz",
15+
"bids::sub-03/ses-mri/func/sub-03_ses-mri_task-facerecognition_run-09_bold.nii.gz"
16+
]
17+
}

0 commit comments

Comments
 (0)