diff --git a/Dockerfile b/Dockerfile index 29b9cc4..5427c04 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,8 +1,8 @@ -FROM ghcr.io/bento-platform/bento_base_image:python-debian-2024.03.01 +FROM ghcr.io/bento-platform/bento_base_image:python-debian-2024.04.01 # Use uvicorn (instead of hypercorn) in production since I've found # multiple benchmarks showing it to be faster - David L -RUN pip install --no-cache-dir "uvicorn[standard]==0.28.0" +RUN pip install --no-cache-dir "uvicorn[standard]==0.29.0" # Backwards-compatible with old BentoV2 container layout WORKDIR /service-registry diff --git a/dev.Dockerfile b/dev.Dockerfile index 7649580..35181bc 100644 --- a/dev.Dockerfile +++ b/dev.Dockerfile @@ -1,6 +1,6 @@ -FROM ghcr.io/bento-platform/bento_base_image:python-debian-2024.03.01 +FROM ghcr.io/bento-platform/bento_base_image:python-debian-2024.04.01 -RUN pip install --no-cache-dir "uvicorn[standard]==0.28.0" +RUN pip install --no-cache-dir "uvicorn[standard]==0.29.0" # Backwards-compatible with old BentoV2 container layout WORKDIR /service-registry diff --git a/poetry.lock b/poetry.lock index 61b600a..361bc8a 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2,13 +2,13 @@ [[package]] name = "aiodns" -version = "3.1.1" +version = "3.2.0" description = "Simple DNS resolver for asyncio" optional = false python-versions = "*" files = [ - {file = "aiodns-3.1.1-py3-none-any.whl", hash = "sha256:a387b63da4ced6aad35b1dda2d09620ad608a1c7c0fb71efa07ebb4cd511928d"}, - {file = "aiodns-3.1.1.tar.gz", hash = "sha256:1073eac48185f7a4150cad7f96a5192d6911f12b4fb894de80a088508c9b3a99"}, + {file = "aiodns-3.2.0-py3-none-any.whl", hash = "sha256:e443c0c27b07da3174a109fd9e736d69058d808f144d3c9d56dbd1776964c5f5"}, + {file = "aiodns-3.2.0.tar.gz", hash = "sha256:62869b23409349c21b072883ec8998316b234c9a9e36675756e8e317e8768f72"}, ] [package.dependencies] @@ -27,87 +27,87 @@ files = [ [[package]] name = "aiohttp" -version = "3.9.4" +version = "3.9.5" description = "Async http 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"sha256:e08e13ecdca7a0bd53798f356d5831434afa5b07b93f0abdf0797b7a06ffe197"}, + {file = "virtualenv-20.25.3-py3-none-any.whl", hash = "sha256:8aac4332f2ea6ef519c648d0bc48a5b1d324994753519919bddbb1aff25a104e"}, + {file = "virtualenv-20.25.3.tar.gz", hash = "sha256:7bb554bbdfeaacc3349fa614ea5bff6ac300fc7c335e9facf3a3bcfc703f45be"}, ] [package.dependencies] @@ -1828,18 +1829,18 @@ filelock = ">=3.12.2,<4" platformdirs = ">=3.9.1,<5" [package.extras] -docs = ["furo (>=2023.7.26)", "proselint (>=0.13)", "sphinx (>=7.1.2)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=23.6)"] +docs = ["furo (>=2023.7.26)", "proselint (>=0.13)", "sphinx (>=7.1.2,!=7.3)", "sphinx-argparse (>=0.4)", "sphinxcontrib-towncrier (>=0.2.1a0)", "towncrier (>=23.6)"] test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess (>=1)", "flaky (>=3.7)", "packaging (>=23.1)", "pytest (>=7.4)", "pytest-env (>=0.8.2)", "pytest-freezer (>=0.4.8)", "pytest-mock (>=3.11.1)", "pytest-randomly (>=3.12)", "pytest-timeout (>=2.1)", "setuptools (>=68)", "time-machine (>=2.10)"] [[package]] name = "werkzeug" -version = "3.0.1" +version = "3.0.2" description = "The comprehensive WSGI web application library." optional = false python-versions = ">=3.8" files = [ - {file = "werkzeug-3.0.1-py3-none-any.whl", hash = "sha256:90a285dc0e42ad56b34e696398b8122ee4c681833fb35b8334a095d82c56da10"}, - {file = "werkzeug-3.0.1.tar.gz", hash = "sha256:507e811ecea72b18a404947aded4b3390e1db8f826b494d76550ef45bb3b1dcc"}, + {file = "werkzeug-3.0.2-py3-none-any.whl", hash = "sha256:3aac3f5da756f93030740bc235d3e09449efcf65f2f55e3602e1d851b8f48795"}, + {file = "werkzeug-3.0.2.tar.gz", hash = "sha256:e39b645a6ac92822588e7b39a692e7828724ceae0b0d702ef96701f90e70128d"}, ] [package.dependencies] @@ -1954,4 +1955,4 @@ multidict = ">=4.0" [metadata] lock-version = "2.0" python-versions = "^3.10.0" -content-hash = "07433db6e114b1cccf6fd6d62e3238b0762f31a95ac09cca80ae942aa560042b" +content-hash = "9950beb050ab59ca1ad98656c1c369932ee76cfac4b3a0aeacef9a88afa95ce9" diff --git a/pyproject.toml b/pyproject.toml index 5ad7e02..a10f105 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -4,7 +4,7 @@ build-backend = "poetry.core.masonry.api" [tool.poetry] name = "bento_service_registry" -version = "1.3.6" +version = "1.3.7" description = "An implementation of GA4GH Service Registry API for the Bento platform." authors = ["David Lougheed "] readme = "README.md" @@ -19,23 +19,23 @@ classifiers = [ [tool.poetry.dependencies] python = "^3.10.0" -aiodns = "^3.0.0" +aiodns = "^3.2.0" aiofiles = "^23.2.1" -aiohttp = "^3.9.4" -bento-lib = {extras = ["fastapi"], version = "^11.5.0"} -fastapi = "^0.109.2" -pydantic = "^2.6.1" -pydantic-settings = "^2.1.0" -orjson = "^3.9.15" +aiohttp = "^3.9.5" +bento-lib = {extras = ["fastapi"], version = "^11.6.0"} +fastapi = "^0.110.2" +pydantic = "^2.7.0" +pydantic-settings = "^2.2.1" +orjson = "^3.10.1" [tool.poetry.group.dev.dependencies] -coverage = "^7.2.1" +coverage = "^7.4.4" debugpy = "^1.8.1" flake8 = "^7.0.0" -httpx = "^0.26.0" -mypy = "~1.8.0" +httpx = "^0.27.0" +mypy = "~1.9.0" pytest = "^7.4.4" -pytest-asyncio = "^0.23.5" +pytest-asyncio = "^0.23.6" pytest-cov = "^4.0.0" -tox = "^4.12.1" +tox = "^4.14.2" types-aiofiles = "^23.2.0"