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r-pkg.xls
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r-pkg.xls
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acepack acepack 1.4.1 NA
ape ape 5.5 NA
askpass askpass 1.1 NA
assertthat assertthat 0.2.1 NA
backports backports 1.4.1 NA
bayesm bayesm 3.1-4 NA
beeswarm beeswarm 0.4.0 NA
BH BH 1.78.0-0 NA
BiocManager BiocManager 1.30.16 NA
bit bit 4.0.4 NA
bit64 bit64 4.0.5 NA
blob blob 1.2.2 NA
brew brew 1.0-6 NA
brio brio 1.1.3 NA
broom broom 0.7.10 NA
cachem cachem 1.0.6 NA
callr callr 3.5.1 NA
caret caret 6.0-86 NA
cellranger cellranger 1.1.0 NA
checkmate checkmate 2.0.0 NA
cli cli 3.1.0 NA
clipr clipr 0.7.1 NA
colorspace colorspace 2.0-2 NA
commonmark commonmark 1.7 NA
covr covr 3.5.1 NA
cpp11 cpp11 0.4.2 NA
crayon crayon 1.4.2 NA
credentials credentials 1.3.2 NA
crosstalk crosstalk 1.2.0 NA
curl curl 4.3.2 NA
DASTool DASTool 1.1.3 NA
data.table data.table 1.12.2 NA
DBI DBI 1.1.1 NA
dbplyr dbplyr 2.1.1 NA
DEoptimR DEoptimR 1.0-9 NA
desc desc 1.4.0 NA
DESeq2 DESeq2 1.24.0 NA
devtools devtools 1.13.6 NA
diffobj diffobj 0.3.5 NA
digest digest 0.6.27 NA
doMC doMC 1.3.7 NA
doParallel doParallel 1.0.16 NA
dplyr dplyr 1.0.7 NA
DT DT 0.20 NA
dtplyr dtplyr 1.2.0 NA
dynamicTreeCut dynamicTreeCut 1.63-1 NA
edgeR edgeR 3.24.3 NA
ellipse ellipse 0.4.2 NA
ellipsis ellipsis 0.3.2 NA
estimate estimate 1.0.13 NA
evaluate evaluate 0.14 NA
exactRankTests exactRankTests 0.8-34 NA
fansi fansi 0.5.0 NA
farver farver 2.1.0 NA
fastcluster fastcluster 1.2.3 NA
fastmap fastmap 1.0.0 NA
fit.models fit.models 0.64 NA
forcats forcats 0.5.1 NA
Formula Formula 1.2-4 NA
fs fs 1.5.0 NA
future future 1.23.0 NA
future.apply future.apply 1.8.1 NA
gargle gargle 1.2.0 NA
generics generics 0.1.1 NA
ggdendro ggdendro 0.1.22 NA
ggfortify ggfortify 0.4.13 NA
ggplot2 ggplot2 3.3.5 NA
ggsci ggsci 2.9 NA
ggsignif ggsignif 0.6.3 NA
gh gh 1.3.0 NA
gitcreds gitcreds 0.1.1 NA
globals globals 0.14.0 NA
glue glue 1.4.2 NA
googledrive googledrive 2.0.0 NA
googlesheets4 googlesheets4 1.0.0 NA
GOplot GOplot 1.0.2 NA
gower gower 0.2.2 NA
GSVA GSVA 1.22.4 NA
gtable gtable 0.3.0 NA
haven haven 2.3.1 NA
highr highr 0.9 NA
Hmisc Hmisc 4.2-0 NA
hms hms 1.1.1 NA
htmlTable htmlTable 2.3.0 NA
htmltools htmltools 0.5.1.1 NA
htmlwidgets htmlwidgets 1.5.4 NA
httr httr 1.4.2 NA
ids ids 1.0.1 NA
igraph igraph 1.2.6 NA
iheatmapr iheatmapr 0.4.12 NA
impute impute 1.48.0 NA
indicspecies indicspecies 1.7.9 NA
ipred ipred 0.9-12 NA
isoband isoband 0.2.5 NA
jquerylib jquerylib 0.1.4 NA
jsonlite jsonlite 1.7.2 NA
km.ci km.ci 0.5-2 NA
KMsurv KMsurv 0.1-5 NA
knitr knitr 1.37 NA
labdsv labdsv 2.0-1 NA
labeling labeling 0.4.2 NA
later later 1.1.0.1 NA
lazyeval lazyeval 0.2.2 NA
lifecycle lifecycle 1.0.1 NA
listenv listenv 0.8.0 NA
LRTT LRTT 0.1.0 NA
lubridate lubridate 1.7.10 NA
magrittr magrittr 2.0.1 NA
markdown markdown 1.1 NA
maxstat maxstat 0.7-25 NA
memoise memoise 2.0.1 NA
mime mime 0.12 NA
missForest missForest 1.4 NA
ModelMetrics ModelMetrics 1.2.2.2 NA
modelr modelr 0.1.8 NA
munsell munsell 0.5.0 NA
mvtnorm mvtnorm 1.0-8 NA
nanotime nanotime 0.3.5 NA
NOISeq NOISeq 2.18.0 NA
norm norm 1.0-9.5 NA
OmicsPLS OmicsPLS 2.0.2 NA
openssl openssl 1.4.6 NA
openxlsx openxlsx 4.2.4 NA
pander pander 0.6.4 NA
parallelly parallelly 1.30.0 NA
patchwork patchwork 1.1.1 NA
pbapply pbapply 1.5-0 NA
pcaMethods pcaMethods 1.66.0 NA
pcaPP pcaPP 1.9-73 NA
pheatmap pheatmap 1.0.12 NA
picante picante 1.8.2 NA
pillar pillar 1.6.4 NA
pkgbuild pkgbuild 1.3.0 NA
pkgconfig pkgconfig 2.0.3 NA
pkgload pkgload 1.2.4 NA
plotly plotly 4.10.0 NA
pls pls 2.8-0 NA
plsdepot plsdepot 0.1.17 NA
plyr plyr 1.8.6 NA
polynom polynom 1.4-0 NA
prettyunits prettyunits 1.1.1 NA
pROC pROC 1.18.0 NA
processx processx 3.4.5 NA
prodlim prodlim 2019.11.13 NA
progress progress 1.2.2 NA
promises promises 1.2.0.1 NA
ProtGenerics ProtGenerics 1.6.0 NA
ps ps 1.6.0 NA
purrr purrr 0.3.4 NA
qqman qqman 0.1.8 NA
R6 R6 2.5.1 NA
rappdirs rappdirs 0.3.3 NA
rcmdcheck rcmdcheck 1.4.0 NA
Rcpp Rcpp 1.0.7 NA
RcppCCTZ RcppCCTZ 0.2.10 NA
RcppDate RcppDate 0.0.3 NA
readxl readxl 1.3.1 NA
recipes recipes 0.1.15 NA
rematch rematch 1.0.1 NA
rematch2 rematch2 2.1.2 NA
remotes remotes 2.4.2 NA
reprex reprex 2.0.1 NA
reshape2 reshape2 1.4.4 NA
rex rex 1.2.1 NA
rjson rjson 0.2.20 NA
rlang rlang 0.4.12 NA
rmarkdown rmarkdown 2.11 NA
robust robust 0.6-1 NA
robustbase robustbase 0.93-5 NA
roxygen2 roxygen2 7.1.2 NA
rprojroot rprojroot 2.0.2 NA
rrcov rrcov 1.6-0 NA
rstudioapi rstudioapi 0.13 NA
Rsubread Rsubread 1.24.2 NA
Rtsne Rtsne 0.15 NA
rversions rversions 2.1.1 NA
rvest rvest 1.0.2 NA
scales scales 1.1.1 NA
scatterplot3d scatterplot3d 0.3-41 NA
selectr selectr 0.4-2 NA
sessioninfo sessioninfo 1.2.2 NA
snow snow 0.4-4 NA
softImpute softImpute 1.4-1 NA
SQUAREM SQUAREM 2021.1 NA
STRINGdb STRINGdb 1.25.0 NA
stringi stringi 1.5.3 NA
stringr stringr 1.4.0 NA
survMisc survMisc 0.5.5 NA
sys sys 3.4 NA
Tax4Fun2 Tax4Fun2 1.1.5 NA
testthat testthat 3.0.2 NA
tibble tibble 3.1.6 NA
tidyr tidyr 1.1.4 NA
tidyselect tidyselect 1.1.1 NA
tidyverse tidyverse 1.3.0 NA
timeDate timeDate 3043.102 NA
tinytex tinytex 0.36 NA
tmcn tmcn 0.2-13 NA
tzdb tzdb 0.2.0 NA
utf8 utf8 1.2.2 NA
uuid uuid 1.0-3 NA
vctrs vctrs 0.3.8 NA
viridisLite viridisLite 0.4.0 NA
visdat visdat 0.5.3 NA
waldo waldo 0.3.1 NA
webshot webshot 0.5.2 NA
WGCNA WGCNA 1.68 NA
whisker whisker 0.4 NA
withr withr 2.4.3 NA
xfun xfun 0.29 NA
xml2 xml2 1.3.2 NA
yaml yaml 2.2.1 NA
zip zip 2.2.0 NA
zoo zoo 1.8-9 NA
abind abind 1.4-5 NA
acepack acepack 1.4.1 NA
ada ada 2.0-5 NA
ade4 ade4 1.7-11 NA
affy affy 1.50.0 NA
affyio affyio 1.42.0 NA
agricolae agricolae 1.3-1 NA
airway airway 0.106.2 NA
AlgDesign AlgDesign 1.1-7.3 NA
ALL ALL 1.14.0 NA
animation animation 2.5 NA
annotate annotate 1.50.1 NA
AnnotationDbi AnnotationDbi 1.34.4 NA
AnnotationForge AnnotationForge 1.14.2 NA
AnnotationHub AnnotationHub 2.4.2 NA
ape ape 5.3 NA
ASMap ASMap 1.0-4 NA
assertthat assertthat 0.2.0 NA
backports backports 1.1.0 NA
ballgown ballgown 2.4.3 NA
base base 3.3.1 base
base64 base64 2.0 NA
base64enc base64enc 0.1-3 NA
beanplot beanplot 1.2 NA
BH BH 1.62.0-1 NA
BiasedUrn BiasedUrn 1.07 NA
bindr bindr 0.1.1 NA
bindrcpp bindrcpp 0.2.2 NA
Biobase Biobase 2.32.0 NA
BiocGenerics BiocGenerics 0.18.0 NA
BiocInstaller BiocInstaller 1.22.3 NA
BiocManager BiocManager 1.30.9 NA
BiocParallel BiocParallel 1.6.6 NA
biom biom 0.3.12 NA
biomaRt biomaRt 2.28.0 NA
biomformat biomformat 1.2.0 NA
Biostrings Biostrings 2.40.2 NA
biovizBase biovizBase 1.20.0 NA
bit bit 4.0.4 NA
bit64 bit64 4.0.5 NA
bitops bitops 1.0-6 NA
blob blob 1.1.1 NA
blockmodeling blockmodeling 0.1.8 NA
boot boot 1.3-18 recommended
bootstrap bootstrap 2017.2 NA
BSgenome BSgenome 1.40.1 NA
BSgenome.Hsapiens.UCSC.hg19 BSgenome.Hsapiens.UCSC.hg19 1.4.0 NA
bsseq bsseq 1.8.2 NA
bumphunter bumphunter 1.12.0 NA
calibrate calibrate 1.7.2 NA
callr callr 3.0.0 NA
Category Category 2.38.0 NA
caTools caTools 1.17.1 NA
cgdv17 cgdv17 0.10.0 NA
ChAMP ChAMP 1.10.0 NA
ChAMPdata ChAMPdata 1.10.0 NA
checkmate checkmate 1.8.2 NA
chron chron 2.3-50 NA
class class 7.3-14 recommended
classInt classInt 0.4-2 NA
cli cli 1.0.0 NA
clipr clipr 0.4.1 NA
clisymbols clisymbols 1.2.0 NA
clue clue 0.3-53 NA
cluster cluster 2.0.4 recommended
clusterSim clusterSim 0.46-2 NA
coda coda 0.19-3 NA
codetools codetools 0.2-14 recommended
coin coin 1.1-3 NA
colorspace colorspace 1.3-2 NA
combinat combinat 0.0-8 NA
compiler compiler 3.3.1 base
corpcor corpcor 1.6.9 NA
corrgram corrgram 1.13 NA
corrplot corrplot 0.77 NA
covr covr 3.0.1 NA
cowplot cowplot 0.7.0 NA
crayon crayon 1.3.4 NA
crosstalk crosstalk 1.0.0 NA
cummeRbund cummeRbund 2.14.0 NA
curl curl 2.6 NA
DASTool DASTool 1.1.0 NA
datasets datasets 3.3.1 base
DBI DBI 1.0.0 NA
DEGseq DEGseq 1.38.0 NA
deldir deldir 0.1-23 NA
dendextend dendextend 1.5.2 NA
DEoptimR DEoptimR 1.0-8 NA
desc desc 1.2.0 NA
DESeq DESeq 1.24.0 NA
DESeq2 DESeq2 1.24.0 NA
devtools devtools 2.0.0 NA
dichromat dichromat 2.0-0 NA
digest digest 0.6.18 NA
diptest diptest 0.75-7 NA
DMRcate DMRcate 1.8.6 NA
DMRcatedata DMRcatedata 1.8.2 NA
DMwR DMwR 0.4.1 NA
DNAcopy DNAcopy 1.46.0 NA
DO.db DO.db 2.9 NA
doMC doMC 1.3.7 NA
doParallel doParallel 1.0.14 NA
doRNG doRNG 1.6.6 NA
dotCall64 dotCall64 0.9-5.2 NA
dplyr dplyr 0.8.3 NA
DSS DSS 2.12.0 NA
dtplyr dtplyr 0.0.2 NA
dynamicTreeCut dynamicTreeCut 1.63-1 NA
e1071 e1071 1.6-8 NA
EBSeq EBSeq 1.12.0 NA
edgeR edgeR 3.24.3 NA
ellipse ellipse 0.3-8 NA
ellipsis ellipsis 0.3.0 NA
ensembldb ensembldb 1.4.7 NA
ensemblVEP ensemblVEP 1.12.0 NA
evaluate evaluate 0.10 NA
expm expm 0.999-4 NA
fansi fansi 0.4.0 NA
fastcluster fastcluster 1.1.25 NA
fastICA fastICA 1.2-0 NA
fastmap fastmap 1.0.1 NA
FDb.InfiniumMethylation.hg19 FDb.InfiniumMethylation.hg19 2.2.0 NA
FEM FEM 2.8.0 NA
fields fields 9.6 NA
FirebrowseR FirebrowseR 1.1.35 NA
fission fission 0.106.2 NA
fit.models fit.models 0.5-14 NA
flashClust flashClust 1.01-2 NA
flexmix flexmix 2.3-14 NA
forcats forcats 0.4.0 NA
foreach foreach 1.4.4 NA
foreign foreign 0.8-66 recommended
formatR formatR 1.5 NA
Formula Formula 1.2-1 NA
fpc fpc 2.1-10 NA
fs fs 1.2.6 NA
futile.logger futile.logger 1.4.3 NA
futile.options futile.options 1.0.0 NA
gam gam 1.16.1 NA
gamlss gamlss 5.1-5 NA
gamlss.data gamlss.data 5.1-4 NA
gamlss.dist gamlss.dist 5.1-5 NA
gbm gbm 2.1.5 NA
gclus gclus 1.3.1 NA
gdata gdata 2.17.0 NA
genefilter genefilter 1.54.2 NA
geneLenDataBase geneLenDataBase 1.8.0 NA
geneplotter geneplotter 1.50.0 NA
GenomeInfoDb GenomeInfoDb 1.8.7 NA
GenomicAlignments GenomicAlignments 1.8.4 NA
GenomicFeatures GenomicFeatures 1.24.5 NA
GenomicRanges GenomicRanges 1.24.3 NA
GEOquery GEOquery 2.38.4 NA
getopt getopt 1.20.2 NA
ggplot2 ggplot2 3.0.0 NA
ggpubr ggpubr 0.1.2 NA
ggrepel ggrepel 0.6.5 NA
ggsci ggsci 2.4 NA
ggtree ggtree 1.4.20 NA
gh gh 1.0.1 NA
git2r git2r 0.23.0 NA
glmnet glmnet 2.0-10 NA
glue glue 1.3.1 NA
gmodels gmodels 2.18.1 NA
GO.db GO.db 3.3.0 NA
GOSemSim GOSemSim 1.30.3 NA
goseq goseq 1.24.0 NA
GOstats GOstats 2.38.1 NA
gplots gplots 3.0.1 NA
graph graph 1.50.0 NA
graphics graphics 3.3.1 base
grDevices grDevices 3.3.1 base
grid grid 3.3.1 base
gridBase gridBase 0.4-7 NA
gridExtra gridExtra 2.2.1 NA
gridSVG gridSVG 1.5-1 NA
GSEABase GSEABase 1.34.1 NA
gsubfn gsubfn 0.6-6 NA
gtable gtable 0.2.0 NA
gtools gtools 3.5.0 NA
Gviz Gviz 1.16.5 NA
hash hash 2.2.6 NA
haven haven 2.1.1 NA
hexbin hexbin 1.27.1 NA
hgu95av2 hgu95av2 2.2.0 NA
hgu95av2.db hgu95av2.db 3.2.3 NA
highr highr 0.6 NA
Hmisc Hmisc 4.1-1 NA
hms hms 0.5.1 NA
htmlTable htmlTable 1.12 NA
htmltools htmltools 0.4.0 NA
htmlwidgets htmlwidgets 0.8 NA
httpuv httpuv 1.5.2 NA
httr httr 1.2.1 NA
ICC ICC 2.3.0 NA
idr idr 1.2 NA
igraph igraph 1.0.1 NA
Illumina450ProbeVariants.db Illumina450ProbeVariants.db 1.8.0 NA
IlluminaHumanMethylation450kanno.ilmn12.hg19 IlluminaHumanMethylation450kanno.ilmn12.hg19 0.2.1 NA
IlluminaHumanMethylation450kmanifest IlluminaHumanMethylation450kmanifest 0.4.0 NA
IlluminaHumanMethylationEPICmanifest IlluminaHumanMethylationEPICmanifest 0.3.0 NA
illuminaio illuminaio 0.14.0 NA
impute impute 1.46.0 NA
ini ini 0.3.1 NA
inlinedocs inlinedocs 2013.9.3 NA
interactiveDisplayBase interactiveDisplayBase 1.10.3 NA
IRanges IRanges 2.6.1 NA
irlba irlba 2.2.1 NA
irr irr 0.84 NA
isva isva 1.9 NA
iterators iterators 1.0.8 NA
itertools itertools 0.1-3 NA
jackstraw jackstraw 1.1.1 NA
JADE JADE 2.0-0 NA
jpeg jpeg 0.1-8 NA
jsonlite jsonlite 1.4 NA
KEGGREST KEGGREST 1.12.3 NA
kernlab kernlab 0.9-25 NA
KernSmooth KernSmooth 2.23-15 recommended
klaR klaR 0.6-14 NA
knitr knitr 1.20 NA
labeling labeling 0.3 NA
labelled labelled 2.2.1 NA
lambda.r lambda.r 1.1.9 NA
later later 1.0.0 NA
lattice lattice 0.20-33 recommended
latticeExtra latticeExtra 0.6-28 NA
lazyeval lazyeval 0.2.0 NA
leaps leaps 3.0 NA
LearnBayes LearnBayes 2.15.1 NA
lfa lfa 1.2.2 NA
limma limma 3.38.3 NA
locfit locfit 1.5-9.1 NA
logging logging 0.10-108 NA
lpSolve lpSolve 5.6.13 NA
lsr lsr 0.5 NA
lumi lumi 2.24.0 NA
Maaslin Maaslin 0.0.4 NA
magrittr magrittr 1.5 NA
manipulateWidget manipulateWidget 0.10.0 NA
maps maps 3.3.0 NA
maptools maptools 0.9-2 NA
markdown markdown 0.8 NA
marray marray 1.50.0 NA
MASS MASS 7.3-45 recommended
Matrix Matrix 1.2-6 recommended
MatrixModels MatrixModels 0.4-1 NA
matrixStats matrixStats 0.54.0 NA
mclust mclust 5.3 NA
memoise memoise 1.1.0 NA
metagenomeSeq metagenomeSeq 1.16.0 NA
methods methods 3.3.1 base
methylumi methylumi 2.18.2 NA
mgcv mgcv 1.8-12 recommended
mime mime 0.5 NA
minfi minfi 1.18.6 NA
miniUI miniUI 0.1.1.1 NA
minqa minqa 1.2.4 NA
mixOmics mixOmics 6.3.2 NA
mnormt mnormt 1.5-5 NA
modeest modeest 2.1 NA
modeltools modeltools 0.2-21 NA
multcomp multcomp 1.4-6 NA
multtest multtest 2.28.0 NA
munsell munsell 0.5.0 NA
mvtnorm mvtnorm 1.0-6 NA
nanotime nanotime 0.3.5 NA
NbClust NbClust 3.0 NA
nleqslv nleqslv 3.3 NA
nlme nlme 3.1-128 recommended
NMF NMF 0.20.6 NA
nnet nnet 7.3-12 recommended
nnls nnls 1.4 NA
nor1mix nor1mix 1.2-2 NA
numDeriv numDeriv 2016.8-1 NA
openssl openssl 0.9.6 NA
optparse optparse 1.3.2 NA
OrganismDbi OrganismDbi 1.14.1 NA
org.Hs.eg.db org.Hs.eg.db 3.3.0 NA
outliers outliers 0.14 NA
parallel parallel 3.3.1 base
party party 1.2-3 NA
pasilla pasilla 0.12.0 NA
pcaPP pcaPP 1.9-73 NA
penalized penalized 0.9-51 NA
permute permute 0.9-4 NA
PFAM.db PFAM.db 3.3.0 NA
pheatmap pheatmap 1.0.8 NA
pillar pillar 1.4.2 NA
pkgbuild pkgbuild 1.0.2 NA
pkgconfig pkgconfig 2.0.1 NA
pkgload pkgload 1.0.1 NA
pkgmaker pkgmaker 0.22 NA
plogr plogr 0.2.0 NA
plotly plotly 4.6.0 NA
plotrix plotrix 3.6-5 NA
plotROC plotROC 2.0.1 NA
plyr plyr 1.8.4 NA
png png 0.1-7 NA
PolyPhen.Hsapiens.dbSNP131 PolyPhen.Hsapiens.dbSNP131 1.0.2 NA
prabclus prabclus 2.2-6 NA
praise praise 1.0.0 NA
preprocessCore preprocessCore 1.34.0 NA
prettyunits prettyunits 1.0.2 NA
pROC pROC 1.12.1 NA
processx processx 3.2.0 NA
promises promises 1.1.0 NA
proto proto 1.0.0 NA
ps ps 1.2.0 NA
pscl pscl 1.5.2 NA
psy psy 1.1 NA
psych psych 1.7.5 NA
purrr purrr 0.2.2.2 NA
qap qap 0.1-1 NA
qiimer qiimer 0.9.4 NA
qqman qqman 0.1.4 NA
qtl qtl 1.41-6 NA
qtlcharts qtlcharts 0.9-6 NA
quadprog quadprog 1.5-5 NA
quantmod quantmod 0.4-8 NA
quantreg quantreg 5.33 NA
questionr questionr 0.7.0 NA
qvalue qvalue 2.4.2 NA
R2HTML R2HTML 2.3.2 NA
R6 R6 2.2.2 NA
rafalib rafalib 1.0.0 NA
randomForest randomForest 4.6-14 NA
rARPACK rARPACK 0.11-0 NA
RBGL RBGL 1.48.1 NA
rCharts rCharts 0.4.5 NA
rcmdcheck rcmdcheck 1.3.0 NA
RColorBrewer RColorBrewer 1.1-2 NA
Rcpp Rcpp 1.0.2 NA
RcppArmadillo RcppArmadillo 0.7.800.2.0 NA
RcppCCTZ RcppCCTZ 0.2.10 NA
RcppDate RcppDate 0.0.3 NA
RcppEigen RcppEigen 0.3.3.3.0 NA
RcppRoll RcppRoll 0.3.0 NA
RCurl RCurl 1.95-4.8 NA
readr readr 1.3.1 NA
RefFreeEWAS RefFreeEWAS 2.1 NA
registry registry 0.3 NA
remotes remotes 2.0.1 NA
reshape reshape 0.8.6 NA
reshape2 reshape2 1.4.2 NA
rex rex 1.1.2 NA
rgl rgl 0.95.1441 NA
rhdf5 rhdf5 2.16.0 NA
rJava rJava 0.9-10 NA
rjson rjson 0.2.15 NA
RJSONIO RJSONIO 1.3-0 NA
rlang rlang 0.4.1 NA
rmarkdown rmarkdown 1.10 NA
R.methodsS3 R.methodsS3 1.7.1 NA
RMongo RMongo 0.0.25 NA
rngtools rngtools 1.2.4 NA
robust robust 0.4-18 NA
robustbase robustbase 0.92-7 NA
ROC ROC 1.48.0 NA
ROCR ROCR 1.0-7 NA
R.oo R.oo 1.21.0 NA
ropls ropls 1.4.6 NA
ROTS ROTS 1.0.0 NA
rpart rpart 4.1-10 recommended
RPMM RPMM 1.25 NA
rprojroot rprojroot 1.3-2 NA
rrcov rrcov 1.4-3 NA
Rsamtools Rsamtools 1.24.0 NA
RSpectra RSpectra 0.13-1 NA
RSQLite RSQLite 2.1.1 NA
rstudioapi rstudioapi 0.8 NA
rtracklayer rtracklayer 1.32.2 NA
RUnit RUnit 0.4.31 NA
R.utils R.utils 2.5.0 NA
S4Vectors S4Vectors 0.10.3 NA
samr samr 2.0 NA
sandwich sandwich 2.3-4 NA
scales scales 1.0.0 NA
scatterplot3d scatterplot3d 0.3-40 NA
segmented segmented 0.5-3.0 NA
seqinr seqinr 3.4-5 NA
seriation seriation 1.2-3 NA
sessioninfo sessioninfo 1.1.0 NA
sf sf 0.7-1 NA
SGSeq SGSeq 1.6.12 NA
shiny shiny 1.4.0 NA
shinythemes shinythemes 1.1.1 NA
siggenes siggenes 1.46.0 NA
sleuth sleuth 0.28.1 NA
snow snow 0.4-2 NA
sourcetools sourcetools 0.1.6 NA
sp sp 1.2-4 NA
spam spam 2.2-0 NA
spam64 spam64 2.2-0 NA
SparseM SparseM 1.77 NA
spatial spatial 7.3-11 recommended
spData spData 0.3.2 NA
spdep spdep 1.1-3 NA
splines splines 3.3.1 base
sqldf sqldf 0.4-10 NA
statmod statmod 1.4.30 NA
stats stats 3.3.1 base
stats4 stats4 3.3.1 base
STRINGdb STRINGdb 1.25.0 NA
stringi stringi 1.2.4 NA
stringr stringr 1.3.1 NA
strucchange strucchange 1.5-1 NA
SummarizedExperiment SummarizedExperiment 1.2.3 NA
survival survival 2.39-4 recommended
survivalROC survivalROC 1.0.3 NA
sva sva 3.20.0 NA
Tax4Fun Tax4Fun 0.3.1 NA
tcltk tcltk 3.3.1 base
testthat testthat 1.0.2 NA
TH.data TH.data 1.0-8 NA
tibble tibble 2.1.3 NA
tidyr tidyr 0.6.3 NA
tidyselect tidyselect 0.2.5 NA
tinytex tinytex 0.6 NA
tools tools 3.3.1 base
topGO topGO 2.24.0 NA
trimcluster trimcluster 0.1-2 NA
tseries tseries 0.10-40 NA
TSP TSP 1.1-6 NA
TTR TTR 0.23-1 NA
TxDb.Hsapiens.UCSC.hg19.knownGene TxDb.Hsapiens.UCSC.hg19.knownGene 3.2.2 NA
tximport tximport 1.0.3 NA
tximportData tximportData 1.0.2 NA
UNDO UNDO 1.14.0 NA
units units 0.6-4 NA
UpSetR UpSetR 1.3.3 NA
usethis usethis 1.4.0 NA
utf8 utf8 1.1.4 NA
utils utils 3.3.1 base
VariantAnnotation VariantAnnotation 1.18.7 NA
variants variants 0.99.120872 NA
vctrs vctrs 0.2.0 NA
vegan vegan 2.4-3 NA
VennDiagram VennDiagram 1.6.18 NA
venneuler venneuler 1.1-0 NA
viridis viridis 0.4.0 NA
viridisLite viridisLite 0.2.0 NA
vsn vsn 3.40.0 NA
wateRmelon wateRmelon 1.17.0 NA
webshot webshot 0.5.1 NA
WGCNA WGCNA 1.66 NA
WGCNA_old WGCNA_old 1.62 NA
whisker whisker 0.3-2 NA
withr withr 2.1.2 NA
xfun xfun 0.3 NA
xlsx xlsx 0.6.1 NA
xlsxjars xlsxjars 0.6.1 NA
XML XML 3.98-1.7 NA
xopen xopen 1.0.0 NA
xtable xtable 1.8-2 NA
xts xts 0.9-7 NA
XVector XVector 0.12.1 NA
yaml yaml 2.1.14 NA
zeallot zeallot 0.1.0 NA
zlibbioc zlibbioc 1.18.0 NA
zoo zoo 1.8-9 NA