diff --git a/README.md b/README.md index ac2f2db..7a12653 100644 --- a/README.md +++ b/README.md @@ -13,6 +13,7 @@ A collection of AWS HealthOmics workflows to accelerate drug discovery. - [Alphafold2-Multimer](https://github.com/aws-samples/drug-discovery-workflows/tree/main/assets/workflows/alphafold2-multimer): From Google DeepMind. Predict the 3D structure of multi-chain protein complexes. - [AlphaBind](https://github.com/A-Alpha-Bio/alphabind): From A-Alpha Bio. Predict and optimize antibodu-antigen binding affinity. - [AMPLIFY Pseudo Perplexity](https://github.com/chandar-lab/AMPLIFY): From Amgen and Mila. Calculate the pseudoperplexity of an amino acid sequence using a protein language model. +- [BioNeMo NiM Protein Design](https://docs.nvidia.com/nim/#bionemo) Use BioNeMo NiM containers to design proteins using RFDifusion, ProteinMPNN, and AlphaFold-Multimer. - [ESMfold](https://github.com/aws-samples/drug-discovery-workflows/tree/main/assets/workflows/esmfold): From Meta. Rapidly predict protein structures using embeddings geneted by the ESM2 protein language model. - [EvoProtGrad](https://github.com/NREL/EvoProtGrad): From NREL. Directed evolution on a protein sequence with gradient-based discrete Markov chain monte carlo (MCMC). - [Generate Protein Sequence Embeddings](https://github.com/aws-samples/drug-discovery-workflows/tree/main/assets/workflows/generate-protein-seq-embeddings): From Meta. Generate ESM-2 vector embeddings for one or more protein amino acid sequences.