The derivation table is relatively simple by comparison. It just has two columns, the derivation id and the derivation. But, the derivation comes from the supplied derivation, predecessor, or comment column @@ -549,190 +549,190 @@
subset_t
-#> # A tibble: 25 × 22
+#> # A tibble: 25 × 21
#> dataset variable key_seq order keep core supp_flag type length label
#> <chr> <chr> <int> <int> <lgl> <chr> <lgl> <chr> <int> <chr>
#> 1 DM STUDYID 1 1 TRUE NA NA text 12 Study I…
@@ -187,9 +187,9 @@ Example
#> 9 DM RFICDTC NA 9 FALSE NA NA datetime 20 Date/Ti…
#> 10 DM RFPENDTC NA 10 FALSE NA NA datetime 20 Date/Ti…
#> # ℹ 15 more rows
-#> # ℹ 12 more variables: format <chr>, common <lgl>, code_id <chr>,
+#> # ℹ 11 more variables: format <chr>, common <lgl>, code_id <chr>,
#> # derivation_id <chr>, origin <chr>, where <chr>, sig_dig <int>,
-#> # derivation <chr>, name <chr>, codes <list>, idvar <chr>, qeval <chr>Fillmore C, Gans M, Tarasiewicz A, Stackhouse M (2023). +
Fillmore C, Gans M, Tarasiewicz A, Stackhouse M, Senior T (2024). metacore: A Centralized Metadata Object Focus on Clinical Trial Data Programming Workflows. -https://atorus-research.github.io/metacore/, https://github.com/atorus-research/metacore. +R package version 0.1.3, https://github.com/atorus-research/metacore, https://atorus-research.github.io/metacore/.
@Manual{,
title = {metacore: A Centralized Metadata Object Focus on Clinical Trial Data Programming Workflows},
- author = {Christina Fillmore and Maya Gans and Ashley Tarasiewicz and Mike Stackhouse},
- year = {2023},
- note = {https://atorus-research.github.io/metacore/, https://github.com/atorus-research/metacore},
+ author = {Christina Fillmore and Maya Gans and Ashley Tarasiewicz and Mike Stackhouse and Tamara Senior},
+ year = {2024},
+ note = {R package version 0.1.3, https://github.com/atorus-research/metacore},
+ url = {https://atorus-research.github.io/metacore/},
}
NEWS.md
+
+
Developed by Christina Fillmore, Maya Gans, Ashley Tarasiewicz, Mike Stackhouse, GSK/Atorus JPT.
+Developed by Christina Fillmore, Maya Gans, Ashley Tarasiewicz, Mike Stackhouse, Tamara Senior, GSK/Atorus JPT.
Returns the dataset keys for a given dataset
+get_keys(metacode, dataset)metacore object
A dataset name
a 2-column tibble with dataset key variables and key sequence
+if (FALSE) {
+meta_ex <- spec_to_metacore(metacore_example("p21_mock.xlsx"))
+get_keys(meta_ex, "AE")
+get_keys(meta_ex, AE)
+}
+get_control_term()
Get Control Term
Get Dataset Keys
Developed by Christina Fillmore, Maya Gans, Ashley Tarasiewicz, Mike Stackhouse, GSK/Atorus JPT.
+Developed by Christina Fillmore, Maya Gans, Ashley Tarasiewicz, Mike Stackhouse, Tamara Senior, GSK/Atorus JPT.
This function takes the location of an excel specification document and reads it in as a meta core object. At the moment it only supports specification in -the format of pinnacle 21 specifications. But, the @family spec builder can -be used as building blocks for bespoke specification documents
+the format of pinnacle 21 specifications. But, the section level spec builder can +be used as building blocks for bespoke specification documents.