From bf7367c4414abc5ce28381ba8b08c0381724dfe3 Mon Sep 17 00:00:00 2001
From: ken-sc01 <ken.schrei@gmail.com>
Date: Tue, 24 Sep 2024 15:10:07 +0200
Subject: [PATCH] update tensorboard logdir in tutorials 2 and 3 and formatting
 in 5

---
 examples/tutorials/tutorial_02_qm9.ipynb          |  6 +++---
 examples/tutorials/tutorial_03_force_models.ipynb |  6 +++---
 examples/tutorials/tutorial_05_materials.ipynb    | 10 ++++++----
 3 files changed, 12 insertions(+), 10 deletions(-)

diff --git a/examples/tutorials/tutorial_02_qm9.ipynb b/examples/tutorials/tutorial_02_qm9.ipynb
index 72f7b748f..5c64da654 100644
--- a/examples/tutorials/tutorial_02_qm9.ipynb
+++ b/examples/tutorials/tutorial_02_qm9.ipynb
@@ -341,7 +341,7 @@
     "\n",
     "You can have a look at the training log using Tensorboard:\n",
     "```\n",
-    "tensorboard --logdir=qm9tut/default\n",
+    "tensorboard --logdir=qm9tut/lightning_logs\n",
     "```\n",
     "\n"
    ]
@@ -531,12 +531,12 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.10.12"
+   "version": "3.12.3"
   },
   "nbsphinx": {
    "execute": "never"
   }
  },
  "nbformat": 4,
- "nbformat_minor": 2
+ "nbformat_minor": 4
 }
diff --git a/examples/tutorials/tutorial_03_force_models.ipynb b/examples/tutorials/tutorial_03_force_models.ipynb
index beb8d8228..187ccd9b0 100644
--- a/examples/tutorials/tutorial_03_force_models.ipynb
+++ b/examples/tutorials/tutorial_03_force_models.ipynb
@@ -736,7 +736,7 @@
     "\n",
     "You can have a look at the log using Tensorboard:\n",
     "```\n",
-    "tensorboard --logdir=forcetut/default\n",
+    "tensorboard --logdir=forcetut/lightning_logs\n",
     "```"
    ]
   },
@@ -1462,12 +1462,12 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.8.13"
+   "version": "3.12.3"
   },
   "nbsphinx": {
    "execute": "never"
   }
  },
  "nbformat": 4,
- "nbformat_minor": 2
+ "nbformat_minor": 4
 }
diff --git a/examples/tutorials/tutorial_05_materials.ipynb b/examples/tutorials/tutorial_05_materials.ipynb
index 954d0ce4a..7e84d5d9a 100644
--- a/examples/tutorials/tutorial_05_materials.ipynb
+++ b/examples/tutorials/tutorial_05_materials.ipynb
@@ -437,10 +437,11 @@
    ]
   },
   {
-   "cell_type": "raw",
-   "id": "dc79934d",
+   "cell_type": "markdown",
+   "id": "62137cf8-8f40-41d0-9d98-a2634394e5b0",
    "metadata": {},
    "source": [
+    "```yaml\n",
     "_target_: schnetpack.md.calculators.SchNetPackCalculator\n",
     "required_properties:\n",
     "  - energy\n",
@@ -462,7 +463,8 @@
     "      cutoff: 5.0\n",
     "    nbh_transforms:\n",
     "      - _target_: schnetpack.transform.FilteredNeighbors\n",
-    "        selection_name: filtered_out_neighbors"
+    "        selection_name: filtered_out_neighbors\n",
+    "```"
    ]
   },
   {
@@ -710,7 +712,7 @@
    "name": "python",
    "nbconvert_exporter": "python",
    "pygments_lexer": "ipython3",
-   "version": "3.10.12"
+   "version": "3.12.3"
   }
  },
  "nbformat": 4,