typos

Author: lfarv

docs/p/notebooks/response_matrices.ipynb

@@ -16,7 +16,7 @@
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+   "execution_count": 55,
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@@ -38,7 +38,7 @@
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@@ -55,7 +55,7 @@
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+   "execution_count": 57,
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@@ -73,7 +73,7 @@
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@@ -131,7 +131,7 @@
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+   "execution_count": 59,
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@@ -164,7 +164,7 @@
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+   "execution_count": 60,
    "id": "8490caa3-14c1-4c7f-ba1e-f4e64078b6a5",
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@@ -196,7 +196,7 @@
   },
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-   "execution_count": 25,
+   "execution_count": 61,
    "id": "2d64d87b-ba18-4c22-921f-f6765f74080d",
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@@ -233,12 +233,12 @@
     "   saved values or experimentally measured values,\n",
     "3. {py:meth}`~.ResponseMatrix.build_tracking` computes the matrix using tracking,\n",
     "4. For some specialized response matrices\n",
-    "   {py:meth}`~OrbitResponseMatrix.build_analytical} is available.\n"
+    "   {py:meth}`~OrbitResponseMatrix.build_analytical` is available.\n"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 26,
+   "execution_count": 62,
    "id": "23154d5d-bdf8-43ed-8b4a-cfc616d7e659",
    "metadata": {
     "editable": true,
@@ -266,7 +266,7 @@
        "         -7.6711941 ,  16.94982252]], shape=(80, 128))"
       ]
      },
-     "execution_count": 26,
+     "execution_count": 62,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -320,7 +320,7 @@
   },
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-   "execution_count": 27,
+   "execution_count": 63,
    "id": "f74e856f-0c6f-4a89-9493-255c1cc3f03f",
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@@ -373,7 +373,7 @@
   },
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-   "execution_count": 28,
+   "execution_count": 64,
    "id": "64e02b6c-2b89-4f5a-b7e1-b9e4e8af0a8b",
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@@ -403,7 +403,7 @@
   },
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-   "execution_count": 29,
+   "execution_count": 65,
    "id": "bee36f70-ccab-4f5e-a746-c4d86cdbb3fc",
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@@ -466,7 +466,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 30,
+   "execution_count": 66,
    "id": "317e2a0f-0e81-479e-89fb-71c49fe03d70",
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     "editable": true,
@@ -494,15 +494,15 @@
     "#### Exclusion of observables\n",
     "\n",
     "Observables are selected by their name or position in the observable list. In addition, for\n",
-    "{py:class}`ElementObservable` observables, we need to specify a _refpts_ to identify which item\n",
+    "{py:class}`.ElementObservable` observables, we need to specify a _refpts_ to identify which item\n",
     "in the array will be excluded.\n",
     "\n",
     "Let's exclude all Monitors with name _BPM\\_07_:"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 31,
+   "execution_count": 67,
    "id": "4223c1bf-0108-4068-b938-4d9313c48684",
    "metadata": {
     "editable": true,
@@ -532,7 +532,7 @@
   },
   {
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-   "execution_count": 32,
+   "execution_count": 68,
    "id": "208f3e79-7ab5-4647-95bd-bb4d8787bea0",
    "metadata": {
     "editable": true,
@@ -577,7 +577,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 33,
+   "execution_count": 69,
    "id": "1cb0b249-8cca-4409-9277-217ba1442a78",
    "metadata": {
     "editable": true,
@@ -613,7 +613,7 @@
     "tags": []
    },
    "source": [
-    "The exclusion masks can de reset using {py:meth}`~.ResponseMatrix.reset_vars` and\n",
+    "The exclusion masks can be reset using {py:meth}`~.ResponseMatrix.reset_vars` and\n",
     "{py:meth}`~.ResponseMatrix.reset_obs`.\n",
     "\n",
     "## Orbit response matrix\n",
@@ -640,7 +640,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 34,
+   "execution_count": 70,
    "id": "8e703ee8-0aba-452c-808d-0621ef4e5f1e",
    "metadata": {
     "editable": true,
@@ -679,14 +679,14 @@
     "{py:class}`.OrbitResponseMatrix` has a {py:meth}`~.OrbitResponseMatrix.build_analytical` build method,\n",
     "using formulas from [^Franchi].\n",
     "\n",
-    "[^Franchi]: A. Franchi, S.M. Liuzzo, Z, Marti, _\"Analytic formulas for the rapid evaluation of the orbit\n",
+    "[^Franchi]: A. Franchi, S.M. Liuzzo, Z. Marti, _\"Analytic formulas for the rapid evaluation of the orbit\n",
     "response matrix and chromatic functions from lattice parameters in circular accelerators\"_,\n",
     "arXiv:1711.06589 [physics.acc-ph]"
    ]
   },
   {
    "cell_type": "code",
-   "execution_count": 35,
+   "execution_count": 71,
    "id": "65a21d36-6d0d-46f0-ba72-5092fec3ab17",
    "metadata": {
     "editable": true,
@@ -715,7 +715,7 @@
        "      shape=(81, 49))"
       ]
      },
-     "execution_count": 35,
+     "execution_count": 71,
      "metadata": {},
      "output_type": "execute_result"
     }
@@ -783,7 +783,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 36,
+   "execution_count": 72,
    "id": "8c7de11a-d8e5-4fd9-9784-25a9244a0305",
    "metadata": {
     "editable": true,

pyat/at/latticetools/response_matrix.py

@@ -110,7 +110,7 @@
 
 Variables may be added to a set of excluded values, and similarly for observables.
 Excluding an item does not change the response matrix. The values are excluded from the
-pseudo-inversion of the response, possibly reducing thenumber of singular values.
+pseudo-inversion of the response, possibly reducing the number of singular values.
 After inversion the correction matrix is expanded to its original size by inserting
 zero lines and columns at the location of excluded items. This way:
 
@@ -231,14 +231,14 @@ def __init__(self, nobs, nvar):
         self.singular_values = None
 
     def reset_vars(self):
-        """Reset the variable exclusion mask: enable variables"""
+        """Reset the variable exclusion mask: enable all variables"""
         self._varmask = np.ones(self.shape[1], dtype=bool)
         self.v = None
         self.uh = None
         self.singular_values = None
 
     def reset_obs(self):
-        """Reset the observable exclusion mask: enable observables"""
+        """Reset the observable exclusion mask: enable all observables"""
         self._obsmask = np.ones(self.shape[0], dtype=bool)
         self.v = None
         self.uh = None