CHANGELOG.md

0.11.0 - 2024-10-25

What's Changed

New Features

• Add combine_roulette function by @aloctavodia in #555
• Add combine function by @aloctavodia in #557
• mle: handle multidimensional samples by @aloctavodia in #568

Documentation

• Add ChangeLog to website by @rohanbabbar04 in #562
• Distribution Gallery: Add Laplace by @aleicazatti in #553
• Distributions Gallery: Add LogitNormal by @aleicazatti in #560
• Distributions Gallery: Add Pareto by @aleicazatti in #563
• Distributions Gallery: Add Rice by @aleicazatti in #565
• Distributions Gallery: Add SkewNormal by @aleicazatti in #566
• Distributions Gallery: Add Moyal by @aleicazatti in #561
• Distributions Gallery: Add SkewStudentT by @aleicazatti in #567
• Distribution Gallery: Add Log-Logistic by @aleicazatti in #556
• Update tagline by @aloctavodia in #558

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.10.0...0.11.0

Changes

0.10.0 - 2024-10-01

What's Changed

New Features

• Extend "to_pymc" to transformed variables by @aloctavodia in #544
• Roulette is a class now and fitted distribution can be accessed with the attribute .dist by @aloctavodia in #546

Maintenance and bug fixes

• Fix bounds and psi param for Hurdle by @aloctavodia in #537
• Remove ArviZ dependency by @aloctavodia in #536
• PPA: several fixes by @aloctavodia in #549

Documentation

• Add reference to PriorDB by @aloctavodia in #535
• Distribution Gallery: Add HalfCauchy by @aleicazatti in #538
• Distribution Gallery: Add HalfNormal by @aleicazatti in #540
• Distribution Gallery: Add HalfStudentT by @aleicazatti in #541
• Distributions Gallery: Add InverseGamma by @aleicazatti in #542
• Distribution Gallery: Add Kumaraswamy by @aleicazatti in #548
• Add bounds to gallery images by @aloctavodia in #539

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.9.1...0.10.0

Changes

0.9.1 - 2024-09-10

What's Changed

• clarify where optimization results are stored by @aloctavodia in #525
• Add docs for conda installation by @rohanbabbar04 in #528
• Add posterior_to_prior example by @rohanbabbar04 in #527
• Distribution Gallery: Beta Alternative Parametrization by @aleicazatti in #529
• Add NegativeBinomial and Bernoulli distributions to Gallery by @aloctavodia in #530
• Add pronunciation audios to gallery by @aloctavodia in #531
• Distribution Gallery: ALD alternative parametrization by @aleicazatti in #532
• Distribution Gallery: Alternative parametrization by @aleicazatti in #533
• Raise error if distribution passed to maxent or quartile is frozen by @aloctavodia in #534

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.9.0...0.9.1

Changes

0.9.0 - 2024-08-16

What's Changed

New Features

• Add posterior_to_prior function by @rohanbabbar04 in #508
• posterior_to_prior: accept idata return string with PyMC model by @aloctavodia in #512
• Add params_dict attribute by @aloctavodia in #521
• Add to_pymc method to distributions by @aloctavodia in #523
• Add bambi support for posterior_to_prior by @rohanbabbar04 in #522

Maintenance and bug fixes

• Solve for pymc>=5.16.0 by @rohanbabbar04 in #485
• Add legend argument to multivariate distributions by @aloctavodia in #488
• Don't run tests if only docs folder changes by @OriolAbril in #495
• Clean namespace and add the missing elements to API doc by @aloctavodia in #511
• Update tests for posterior_to_prior by @rohanbabbar04 in #515

Documentation

• Add Distribution Gallery by @aleicazatti in #465
• Add note about PyMC and Bambi installation by @aloctavodia in #472
• Update normal distribution page by @aleicazatti in #477
• Add Beta distribution to the gallery by @aloctavodia in #478
• Add Student's T distribution page by @aleicazatti in #480
• Gallery: Add script to generate cover images by @aloctavodia in #479
• Add logistic distribution page by @aleicazatti in #481
• Add Cauchy distribution page by @aleicazatti in #483
• Fix Logistic docstring by @aleicazatti in #484
• Add LogNormal distribution page by @aleicazatti in #486
• Add Exponential distribution page by @aleicazatti in #487
• Add Multivariate images to the distribution gallery by @aloctavodia in #489
• Gallery: Add Censored and Truncated distributions. by @aloctavodia in #490
• Add Poisson to the distribution gallery by @aloctavodia in #491
• Gallery: Add uniform distribution page by @aleicazatti in #494
• Gallery: Add asymmetric Laplace distribution by @aloctavodia in #497
• Gallery: Add beta scaled by @aloctavodia in #499
• Gallery: Uniform, remove repeated paragraph by @aleicazatti in #501
• Gallery: Default to API docs for missing cards by @aloctavodia in #502
• Distribution Gallery: add ChiSquared by @aleicazatti in #504
• Add tabs for predictive_explorer in observed_space_examples_all.rst by @rohanbabbar04 in #505
• Distribution Gallery: Add Gamma by @aleicazatti in #506
• use PreliZ style by @aloctavodia in #509
• Distributions Gallery: Add ExGaussian by @aleicazatti in #507
• Distributions Gallery: Add Gumbel by @aleicazatti in #514

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.8.1...0.9.0

Changes

0.8.1 - 2024-06-17

What's Changed

• Fix Missing distributions in api_reference.rst by @rohanbabbar04 in #467
• Improve Docs for predictive functions by @rohanbabbar04 in #468
• Remove sphinx_thebe conf and dependency by @rohanbabbar04 in #469
• fix moments labels by @aloctavodia in #471

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.8.0...0.8.1

Changes

0.8.0 - 2024-06-11

What's Changed

New Features

• Add pymc support to predictive explorer by @rohanbabbar04 in #450
• Add support for engine="auto" and bambi models in predictive explorer by @rohanbabbar04 in #455
• Add example for bambi and pymc to observed_space_examples by @rohanbabbar04 in #456
• use g format string for distribution repr by @aloctavodia in #459
• improve hdi computation and interval representation by @aloctavodia in #458

Maintenance and bug fixes

• Fix TruncatedNormal Docs by @rohanbabbar04 in #446
• improve interval report by @aloctavodia in #457
• fix small issues in docstrings by @aloctavodia in #454

Full Changelog**: https://github.com/arviz-devs/preliz/compare/0.7.0...0.8.0

Changes

0.7.0 - 2024-05-20

What's Changed

New Features

• Add LogLogistic distribution by @aloctavodia in #438
• Adds support for multiple targets with weights to ppe by @rohanbabbar04 in #442

Maintenance and bug fixes

• relax mle test by @aloctavodia in #441
• Add tests to ppe by @rohanbabbar04 in #436
• improve x_val by @aloctavodia in #440

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.6.3...0.7.0

Changes

0.6.3 - 2024-05-15

What's Changed

• Censored and Truncated. Allow bounds to be vectors by @aloctavodia in #431
• Add SkewStudentT by @rohanbabbar04 in #432
• Fix mle bugs in some distributions by @aloctavodia in #434 and #435

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.6.2...0.6.3

Changes

0.6.2 - 2024-05-09

What's Changed

• add metadata to package so it can be added to conda forge by @OriolAbril in #430

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.6.1...0.6.2

Changes

0.6.1 - 2024-05-08

What's Changed

• uneven x_vals by @aloctavodia in #424
• fix binomial logpdf at bounds by @aloctavodia in #425
• ignore modifier distributions when mapping pymc to preliz by @aloctavodia in #426
• use xlogx/y/1py and fix logpdf values outside of the support by @aloctavodia in #428

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.6.0...0.6.1

Changes

0.6.0 - 2024-04-26

What's Changed

New features

• Add Hurdle distribution by @aloctavodia in #398

Add custom distribution (not SciPy wrappers):

• Add Logistic by @rohanbabbar04 in #394
• Add Gumbel by @aloctavodia in #395
• Add Pareto by @rohanbabbar04 in #396
• Add Cauchy by @rohanbabbar04 in #401
• Add LogNormal by @aloctavodia in #402
• Add Kumaraswamy by @aloctavodia in #403
• Add ChiSquared distribution by @aloctavodia in #404
• Add Moyal by @aloctavodia in #405
• Add LogitNormal by @aloctavodia in #406
• Add hypergeometric by @aloctavodia in #407
• Add HalfCauchy by @rohanbabbar04 in #409
• Add DiscreteWeibull by @aloctavodia in #410
• Add BetaBinomial by @aloctavodia in #411
• Add TruncatedNormal by @rohanbabbar04 in #414
• Add SkewNormal by @aloctavodia in #415
• Add Rice by @aloctavodia in #416
• Add BetaScaled by @aloctavodia in #417
• Add ExGaussian by @aloctavodia in #419

Bug fixes and maintenance

• Add env.yml files for conda/mamba install by @rohanbabbar04 in #400
• Remove transition code by @aloctavodia in #420
• improve logpdf ExGaussian by @aloctavodia in #421
• Use neg_logpdf by @aloctavodia in #422
• Fix doc style for ZIB by @aloctavodia in #412
• Remove interpolation for plot_pdf of discrete variables by @aloctavodia in https://github.com/arviz-devs/preliz/pull

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.5.0...0.6.0

Changes

0.5.0 - 2024-04-12

What's Changed

New features

• Add Truncated and Censored distributions by @aloctavodia in #370 and in #372

Bug fixes and maintenance

• Fix bug for predictive_explorer and hist by @aloctavodia in #381
• Beta: rename kappa to nu by @aloctavodia in #385
• Add Python 3.12 to tests by @rohanbabbar04 in #390

Add custom distribution (not SciPy wrappers):

• Add VonMises by @aloctavodia in #376
• Add StudentT and HalfStudentT by @aloctavodia in #379
• Add InverseGamma by @aloctavodia in #382
• Add Wald by @aloctavodia in #384
• Add Gamma by @rohanbabbar04 in #387
• Add Uniform and DiscreteUniform by @aloctavodia in #388
• Add Categorical by @aloctavodia in #389
• Add Triangular by @rohanbabbar04 in #391
• Add Geometric by @aloctavodia in #392

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.4.1...0.5.0

Changes

0.4.1 - 2024-03-20

What's Changed

• Ipython should be optional by @aloctavodia in #369

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.4.0...0.4.1

Changes

0.4.0 - 2024-03-20

What's Changed

• Add plot_interactive to MvNormal by @rohanbabbar04 in #337
• Dirichlet Elicitation by @nishant42491 in #327
• Add faster Normal implementation by @aloctavodia in #344
• Add ppe method for predictive elicitation (very experimental) by @aloctavodia in #336
• Add faster HalfNormal distribution by @aloctavodia in #346
• Add faster Poisson by @aloctavodia in #347
• Add faster Bernoulli and Binomial by @aloctavodia in #348
• Add faster Beta by @aloctavodia in #350
• Add faster NegativeBinomial by @aloctavodia in #351
• Add faster Weibull by @aloctavodia in #353
• Add neg_log_pdf private method by @aloctavodia in #354
• Add faster Exponential by @rohanbabbar04 in #355
• Add faster Laplace by @rohanbabbar04 in #356
• Add n_points argument to x_vals. by @aloctavodia in #357
• Add faster ZINB by @aloctavodia in #359
• Add faster ZIP by @aloctavodia in #360
• Add faster ZIB by @aloctavodia in #362
• Add faster Asymmetric Laplace by @rohanbabbar04 in #364

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.8...0.4.0

Changes

0.3.8 - 2024-02-27

What's Changed

• Add example for plot_func by @rohanbabbar04 in #311
• Added quartile_int to `Direct elicitation in 1D by @rohanbabbar04 in #312
• Adding tests for ppa by @rohanbabbar04 in #313
• Add elicitation of Beta distribution with bounds and mode by @nishant42491 in #309
• Add checkboxes to control distributions in roulette by @rohanbabbar04 in #318
• Make default mass values consistent, invert order fmt-mass, check fmt is a string by @aloctavodia in #314
• Update roulette plot and gif by @rohanbabbar04 in #322
• Add beta mode tests by @nishant42491 in #323
• Updated ppa widgets to include references by @rohanbabbar04 in #328
• Fix MLE for halfnormal by @aloctavodia in #329
• Remove predictive_finder by @aloctavodia in #330
• Add plot_interactive to Dirichlet by @rohanbabbar04 in #332

New Contributors

• @rohanbabbar04 made their first contribution in #311
• @nishant42491 made their first contribution in #309

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.7...0.3.8

Changes

0.3.7 - 2024-01-31

What's Changed

• refactor ppa by @aloctavodia in #295
• Refactor PPA to improve internal documentation by @aloctavodia in #296
• Use systematic resampling for predictive finder by @aloctavodia in #297
• ensure integer x-axis for pmf by @aloctavodia in #298
• fix bug beta distribution sigma/kappa by @aloctavodia in #299
• Bambi parser (very experimental)) by @aloctavodia in #300
• handle comments by @aloctavodia in #301
• add reference values to predictive explorer by @aloctavodia in #302
• check psi valid values for ZeroInflated distributions by @aloctavodia in #304
• add references by @aloctavodia in #305
• Override entropy of TruncatedNormal by @aloctavodia in #306
• predictive_explorer: Add option for custom plot by @aloctavodia in #307

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.6...0.3.7

Changes

0.3.6 - 2023-10-27

What's Changed

• unpin matplotlib by @aloctavodia in #285
• fix a bug in roulette and improve scale by @aloctavodia in #286
• add more distributions to roulette by @aloctavodia in #287
• add quartile_int function by @aloctavodia in #288
• customize roulette by @aloctavodia in #291
• rename predictive_sliders to predictive_explorer refactor and new features by @aloctavodia in #292
• add predictive_finder method (experimental) by @aloctavodia in #293

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.5...0.3.6

Changes

0.3.5 - 2023-10-03

What's Changed

• silence warnings by @aloctavodia in #280
• extend exclude list ppa by @aloctavodia in #282

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.4...0.3.5

Changes

0.3.4 - 2023-09-21

What's Changed

• Fix LaTeX umlaut by @olexandr-konovalov in #277

New Contributors

• @olexandr-konovalov made their first contribution in #277

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.3...0.3.4

Changes

0.3.3 - 2023-09-21

What's Changed

• fix for scipy 1.11.1 by @aloctavodia in #272
• allow singular covariance matrix by @aloctavodia in #274

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.2...0.3.3

Changes

0.3.2 - 2023-08-02

What's Changed

• conditionally import ipywidgets by @aloctavodia in #268
• drop python 3.8 add 3.11 by @aloctavodia in #270

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.1...0.3.2

Changes

0.3.1 - 2023-07-08

What's Changed

• add color and alpha arguments to plot methods by @aloctavodia in #240
• add DiscreteWeibull by @aleicazatti in #239
• add bounds to optimize_moments by @aloctavodia in #243
• add figsize argument to plot_interactive by @aloctavodia in #244
• rename fixed_lim to xy_lim by @aleicazatti in #245
• add tests for DiscreteWeibull by @aleicazatti in #242
• fix entropy and moments of DiscreteWeibull by @aloctavodia in #249
• use koay method for estimation of Rice parameters by @aloctavodia in #251
• add opt example by @aloctavodia in #252
• add overview to readme and landing page by @aloctavodia in #257
• quartile init value and message by @aloctavodia in #256
• specify model used by ppa by @aloctavodia in #258
• add dependency bundles by @aleicazatti in #259
• pin scipy version by @aloctavodia in #265
• predictive slider: better automatic range by @aloctavodia in #264

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.3.0...0.3.1

Changes

0.3.0 - 2023-04-19

What's Changed

• Add optimize_moments internal function by @aloctavodia in #212
• Add HyperGeometric distribution by @aleicazatti in #215
• Fix bug maxent plot_kwargs by @aloctavodia in #216
• Use absolute loss for optimize_moments by @aloctavodia in #217
• Rename Student to StudentT by @aloctavodia in #219
• Add ZeroInflatedBinomial by @aleicazatti in #220
• Add ZeroInflatedNegativeBinomial by @aleicazatti in #222
• Add initial support for MultiVariate Variables by @aloctavodia in #224
• Add alternative parametrization for Wald by @aleicazatti in #230
• Add alternative parametrization for MvNormal by @aleicazatti in #232
• Add alternative parametrization for Exponential by @aleicazatti in #234
• Add Kumaraswamy distribution by @aleicazatti in #231
• Faster KDE predictive sliders by @aloctavodia in #237

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.2.0...0.3.0

Changes

0.2.0 - 2023-02-14

What's Changed

• support non_scalar parameters for rvs, cdf and ppf methods by @aloctavodia in #162
• Add test plot_interactive and roulette by @aloctavodia in #163 and in #164
• Refactor utils by @aloctavodia in #167
• add predictive_sliders function by @aloctavodia in #168
• DOCS: small changes to layout, name of notebook, fix typos, improve wording by @aloctavodia in #170 and in @aloctavodia in #171
• Predictive sliders improve parser by @aloctavodia in #173
• Make ppa PPL agnostic by @aloctavodia in #181
• Add Bernoulli by @aleicazatti in #182
• MLE: return index for sorting distributions by @aloctavodia in #184
• add AICc to mle by @aloctavodia in #186
• PPA: small fixes and refactor by @aloctavodia in #188
• try fixing widgets rendering by @OriolAbril in #187
• PPA: panel for the "total" prior predictive distribution, automatic selection, and family innovation by @aloctavodia in #190
• make ipympl a general requierement by @aloctavodia in #191
• predictive_slider: correct support for histograms of discrete variables by @aloctavodia in #196
• Add Geometric distribution by @aleicazatti in #197
• Point interval: use HDI as default by @aloctavodia in #198
• Add BetaBinomial distribution by @aleicazatti in #200
• Add Rice distribution by @aleicazatti in #203
• add categorical by @aloctavodia in #205
• add logitnormal distribution by @aloctavodia in #206 and in #210
• Add ZeroInflatedPoisson by @aloctavodia in #209

Changes

0.1.1 - 2022-12-31

What's Changed

• Refactor plot_interactive, enforce correct parameter types by @aloctavodia in #157
• Small fixes @aloctavodia in #158 and #160 and #159

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.1.0...0.1.1

Changes

0.1.0 - 2022-12-24

What's Changed

• Add alternative parametrization for halfnormal distribution by @aleicazatti in #106
• Fix warning message for ambiguous parametrization. Normal and Student by @aleicazatti in #108
• Don't add labels if legend is disabled in plot_pdf/cdf/ppf by @aloctavodia in #109
• Add alternative parametrization for SkewNormal distribution by @aleicazatti in #111
• Add test for plots by @aloctavodia in #110
• Add from_tau and to_tau functions to continuous module by @aleicazatti in #113
• PPA: automatically create pymc_to_preliz dict by @aloctavodia in #114
• Add alternative parametrization for HalfStudent distribution by @aleicazatti in #115
• Rename from_tau and to_tau functions as the more general from_precision and to_precision. by @aleicazatti in #117
• Add Logistic distribution by @aleicazatti in #118
• Expose pdf, cdf and ppf by @aloctavodia in #119
• Add Gumbel distribution by @aleicazatti in #120
• Add Moyal distribution by @aleicazatti in #121
• Add alternative parametrization to negative binomial by @aloctavodia in #122
• Add gif of ppa example by @aloctavodia in #123
• ppa: allow non-random initialization by @aloctavodia in #124
• PPA: add representations; ecdf, histogram and option to set/unset sharex by @aloctavodia in #126
• Add test quartile by @aloctavodia in #130
• Specify support for some distributions in the docs by @aleicazatti in #133
• Remove unnecessary calls to rv_frozen method by @aloctavodia in #134
• Allow fixing arbitrary parameters for maxent and quartile by @aloctavodia in #136
• Add ExGaussian distribution by @aloctavodia in #137
• Add triangular distribution by @aleicazatti in #138
• Add docstring examples to maxent and quartile, update notebook to show how to fix parameters by @aloctavodia in #139
• Fix roulette by @aloctavodia in #142
• ppa: add argument to specify reference values by @aloctavodia in #143
• Add interactive method to distributions by @aloctavodia in #145
• Rename interactive to plot_interactive, define integer or float slider as needed, add example by @aloctavodia in #146
• Improve maximum likelihood estimation for NegativeBinomial by @aloctavodia in #147
• Fix typo in README by @aleicazatti in #148
• Increase tolerance Pareto test by @aloctavodia in #149
• Allow fixing alt parameters by @aloctavodia in #150
• Add logo by @aloctavodia in #151
• Remove params_report attribute by @aloctavodia in #153
• Add AsymmetricLaplace by @aleicazatti in #154

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.0.3...0.1.0

Changes

0.0.3 - 2022-11-22

What's Changed

• Add alternative parametrization for beta distribution by @aloctavodia in #94
• Update readme by @aleicazatti in #95
• Add alternative parametrization for normal distribution by @aleicazatti in #97
• update installation instructions by @aloctavodia in #96
• Fix bug by @aleicazatti in #98
• Add alternative parametrization for Student distribution by @aleicazatti in #99
• Add alternative parametrization for gamma distribution by @aleicazatti in #100
• Add ChiSquared distribution by @aleicazatti in #101
• Add alternative parametrization for inverse gamma distribution by @aleicazatti in #103
• Add VonMises distribution by @aleicazatti in #102
• fix corner case for ylim by @aloctavodia in #104
• change pointinterval style by @aloctavodia in #105
• bump release by @aloctavodia in #107

Full Changelog: https://github.com/arviz-devs/preliz/compare/0.0.2...0.0.3

Changes

0.0.2 - 2022-11-08

Changes