submit_req.sh

#!/bin/bash
#SBATCH --account=sdss-np-fast
#SBATCH --partition=sdss-np
#SBATCH --qos=sdss-np-req
#SBATCH --nodes=8
#SBATCH --ntasks-per-node=64

#SBATCH --mem=0 #requesting all of the memory on the node

#SBATCH --time=96:00:00
#SBATCH --job-name=apMADGICS
#SBATCH --output=%x_%j.out
#SBATCH --err=%x_%j.err

#SBATCH --mail-type=ALL
#SBATCH --mail-user=7155301634@vtext.com
# ------------------------------------------------------------------------------

echo $SLURM_JOB_NODELIST

julia +1.10.2 pipeline.jl

# Clean up logs and Report Timing
formatted_time=$(printf '%dd %dh:%dm:%ds\n' $(($SECONDS/86400)) $(($SECONDS%86400/3600)) $(($SECONDS%3600/60)) $(($SECONDS%60)))
echo "Job completed in $formatted_time"

mkdir -p slurm_logs
mv ${SLURM_JOB_NAME}_${SLURM_JOBID}.out slurm_logs/${SLURM_JOB_NAME}_${SLURM_JOBID}.out
mv ${SLURM_JOB_NAME}_${SLURM_JOBID}.err slurm_logs/${SLURM_JOB_NAME}_${SLURM_JOBID}.err