From 7cb70d8632bd83ae57dd7666418198d37ea31a99 Mon Sep 17 00:00:00 2001
From: alsmith <asmith151@outlook.com>
Date: Tue, 9 Apr 2024 14:09:48 +0100
Subject: [PATCH] Add container definition for lanceotron_no_input_consensus
 rule

---
 seqnado/workflow/rules/peak_call_grouped.smk | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/seqnado/workflow/rules/peak_call_grouped.smk b/seqnado/workflow/rules/peak_call_grouped.smk
index 5cf82669..9e728f23 100644
--- a/seqnado/workflow/rules/peak_call_grouped.smk
+++ b/seqnado/workflow/rules/peak_call_grouped.smk
@@ -9,6 +9,8 @@ rule lanceotron_no_input_consensus:
     params:
         outdir="seqnado_output/peaks/merged/lanceotron",
         options=check_options(config["lanceotron"]["callpeak"])
+    container:
+        "library://asmith151/seqnado/seqnado_extra:latest"
     log:
         "seqnado_output/logs/lanceotron/{group}.log",
     shell: