Skip to content

Actions: alsmith151/SeqNado

Actions

Python package

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
test_pipelines.yml
389 workflow run results
389 workflow run results

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

moved macs format to config Python package #734: Commit c6606e6 pushed by CChahrour
March 28, 2024 16:03 36m 32s add-macs-se-option
add-macs-se-option
March 28, 2024 16:03 36m 32s
Feat add transcript counting (#167) Python package #733: Commit 1ddb08e pushed by CChahrour
March 28, 2024 15:51 36m 21s master
master
March 28, 2024 15:51 36m 21s
clean up salmon output files Python package #732: Commit 3d145c5 pushed by CChahrour
March 28, 2024 15:30 35m 37s feat-add-transcript-counting
feat-add-transcript-counting
March 28, 2024 15:30 35m 37s
update path to featurecounts for deseq2 Python package #731: Commit 6c521ce pushed by CChahrour
March 28, 2024 15:04 37m 28s feat-add-transcript-counting
feat-add-transcript-counting
March 28, 2024 15:04 37m 28s
update default salmon index for config Python package #730: Commit df5c1c0 pushed by CChahrour
March 28, 2024 14:39 15m 9s feat-add-transcript-counting
feat-add-transcript-counting
March 28, 2024 14:39 15m 9s
fix salmon rule Python package #729: Commit 5a32ba1 pushed by CChahrour
March 28, 2024 13:28 15m 4s feat-add-transcript-counting
feat-add-transcript-counting
March 28, 2024 13:28 15m 4s
add rna quant methods to test Python package #728: Commit d9b475e pushed by CChahrour
March 28, 2024 12:03 19m 27s feat-add-transcript-counting
feat-add-transcript-counting
March 28, 2024 12:03 19m 27s
add salmon output into design Python package #727: Commit be0ecf6 pushed by CChahrour
March 28, 2024 11:28 13m 32s feat-add-transcript-counting
feat-add-transcript-counting
March 28, 2024 11:28 13m 32s
Update hub.smk and create_hub.py to include new parameters for RNA assay Python package #726: Commit 71edfa4 pushed by alsmith151
March 28, 2024 10:42 35m 55s fix-update-hub-details
fix-update-hub-details
March 28, 2024 10:42 35m 55s
Merge branch 'master' of https://github.com/alsmith151/SeqNado into f… Python package #725: Commit b585e1b pushed by CChahrour
March 27, 2024 14:15 35m 5s feat-add-transcript-counting
feat-add-transcript-counting
March 27, 2024 14:15 35m 5s
update python version for precommit (#163) Python package #724: Commit bdff71b pushed by CChahrour
March 27, 2024 13:04 37m 1s master
master
March 27, 2024 13:04 37m 1s
update python version for precommit Python package #723: Commit 82401bf pushed by CChahrour
March 27, 2024 13:03 35m 33s fix-build-docs-deploy
fix-build-docs-deploy
March 27, 2024 13:03 35m 33s
fix tests for ilb comp (#162) Python package #722: Commit f6b420e pushed by CChahrour
March 27, 2024 12:02 35m 31s master
master
March 27, 2024 12:02 35m 31s
fix tests for ilb comp Python package #721: Commit 0a5be3e pushed by CChahrour
March 27, 2024 11:23 35m 4s fix-library-complexity
fix-library-complexity
March 27, 2024 11:23 35m 4s
add salmon Python package #720: Commit 35ef12d pushed by CChahrour
March 26, 2024 17:49 37m 1s feat-add-transcript-counting
feat-add-transcript-counting
March 26, 2024 17:49 37m 1s
update mem for index Python package #719: Commit e2d0506 pushed by CChahrour
March 26, 2024 17:49 36m 33s feat-add-transcript-counting
feat-add-transcript-counting
March 26, 2024 17:49 36m 33s
Fix add library complexity (#161) Python package #718: Commit 09663fc pushed by CChahrour
March 26, 2024 17:47 4m 3s master
master
March 26, 2024 17:47 4m 3s
Merge branch 'master' into fix-add-library-complexity Python package #717: Commit 50a415e pushed by CChahrour
March 26, 2024 17:47 4m 1s fix-add-library-complexity
fix-add-library-complexity
March 26, 2024 17:47 4m 1s
Add logging to bedgraph generation in pileup_default.smk Python package #716: Commit 67d7ceb pushed by alsmith151
March 26, 2024 17:32 11m 41s feat-add-seacr
feat-add-seacr
March 26, 2024 17:32 11m 41s
Fix awk command in pileup_default.smk Python package #715: Commit c1ce974 pushed by alsmith151
March 26, 2024 17:30 10m 46s feat-add-seacr
feat-add-seacr
March 26, 2024 17:30 10m 46s
Update pileup_default.smk to include outdir parameter Python package #714: Commit 459c1e1 pushed by alsmith151
March 26, 2024 17:29 10m 33s feat-add-seacr
feat-add-seacr
March 26, 2024 17:29 10m 33s
set library complexity to False. temp fix Python package #713: Commit 58989a1 pushed by alsmith151
March 26, 2024 17:29 4m 11s feat-add-seacr
feat-add-seacr
March 26, 2024 17:29 4m 11s
Add 'seacr' as a peak calling method for chip assay Python package #712: Commit 1575609 pushed by alsmith151
March 26, 2024 17:26 4m 13s feat-add-seacr
feat-add-seacr
March 26, 2024 17:26 4m 13s
Fix indentation in deeptools_make_bigwigs rule Python package #711: Commit 02d4ba2 pushed by alsmith151
March 26, 2024 17:20 4m 31s feat-add-seacr
feat-add-seacr
March 26, 2024 17:20 4m 31s
update mem for index Python package #710: Commit e2d0506 pushed by CChahrour
March 26, 2024 17:08 34m 55s fix-add-library-complexity
fix-add-library-complexity
March 26, 2024 17:08 34m 55s