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Using xsf and premitive check
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7 files changed

+72
-510
lines changed

7 files changed

+72
-510
lines changed

aiida_sssp_workflow/protocol/delta.yml

+1-1
Original file line numberDiff line numberDiff line change
@@ -23,7 +23,7 @@ test:
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scale_count: 5
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scale_increment: 0.02
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configurations:
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- XO
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- XO2
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- BCC
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opsp:
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aiida_sssp_workflow/statics/generatecif.ipynb

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This file was deleted.

aiida_sssp_workflow/statics/generatemapping.ipynb

+5-5
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@@ -136,7 +136,7 @@
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"metadata": {},
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"outputs": [],
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"source": [
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"cif_typical_folder = os.path.abspath(\"./cif/typical/\")\n",
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"cif_typical_folder = os.path.abspath(\"./structures/typical/\")\n",
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"\n",
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"sgn_t = {\n",
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" \"229\": \"BCC\",\n",
@@ -184,8 +184,8 @@
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" if e in NO_TYPICAL_CONF_ELEMENTS:\n",
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" # we don't have At in typical\n",
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" d[e] = {\n",
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" \"bands\": f\"unaries/{e}_FCC.cif\",\n",
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" \"convergence\": f\"unaries/{e}_FCC.cif\",\n",
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" \"bands\": f\"unaries/{e}-FCC.xsf\",\n",
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" \"convergence\": f\"unaries/{e}-FCC.xsf\",\n",
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" }\n",
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" continue\n",
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"\n",
@@ -194,8 +194,8 @@
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" # The paper \"Dissertation, Philipps-Universität Marburg, 2022. DOI: 10.13140/RG.2.2.28627.25121\"\n",
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" # use FCC for all actinides.\n",
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" d[e] = {\n",
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" \"bands\": f\"unaries/{e}_FCC.cif\",\n",
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" \"convergence\": f\"unaries/{e}_FCC.cif\",\n",
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" \"bands\": f\"unaries/{e}-FCC.xsf\",\n",
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" \"convergence\": f\"unaries/{e}-FCC.xsf\",\n",
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" }\n",
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" continue\n",
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"\n",

aiida_sssp_workflow/statics/structures/mapping.json

+36-36
Original file line numberDiff line numberDiff line change
@@ -17,8 +17,8 @@
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"convergence": "typical/As.cif"
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},
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"At": {
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"bands": "unaries/At_FCC.cif",
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"convergence": "unaries/At_FCC.cif"
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"bands": "unaries/At-FCC.xsf",
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"convergence": "unaries/At-FCC.xsf"
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},
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"Au": {
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"bands": "typical/Au.cif",
@@ -345,71 +345,71 @@
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"convergence": "typical/Zr.cif"
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},
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"Ac": {
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"bands": "unaries/Ac_FCC.cif",
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"convergence": "unaries/Ac_FCC.cif"
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"bands": "unaries/Ac-FCC.xsf",
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"convergence": "unaries/Ac-FCC.xsf"
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},
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"Th": {
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"bands": "unaries/Th_FCC.cif",
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"convergence": "unaries/Th_FCC.cif"
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"bands": "unaries/Th-FCC.xsf",
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"convergence": "unaries/Th-FCC.xsf"
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},
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"Pa": {
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"bands": "unaries/Pa_FCC.cif",
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"convergence": "unaries/Pa_FCC.cif"
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"bands": "unaries/Pa-FCC.xsf",
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"convergence": "unaries/Pa-FCC.xsf"
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},
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"U": {
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"bands": "unaries/U_FCC.cif",
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"convergence": "unaries/U_FCC.cif"
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"bands": "unaries/U-FCC.xsf",
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"convergence": "unaries/U-FCC.xsf"
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},
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"Np": {
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"bands": "unaries/Np_FCC.cif",
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"convergence": "unaries/Np_FCC.cif"
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"bands": "unaries/Np-FCC.xsf",
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"convergence": "unaries/Np-FCC.xsf"
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},
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"Pu": {
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"bands": "unaries/Pu_FCC.cif",
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"convergence": "unaries/Pu_FCC.cif"
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"bands": "unaries/Pu-FCC.xsf",
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"convergence": "unaries/Pu-FCC.xsf"
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},
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"Am": {
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"bands": "unaries/Am_FCC.cif",
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"convergence": "unaries/Am_FCC.cif"
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"bands": "unaries/Am-FCC.xsf",
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"convergence": "unaries/Am-FCC.xsf"
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},
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"Cm": {
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"bands": "unaries/Cm_FCC.cif",
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"convergence": "unaries/Cm_FCC.cif"
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"bands": "unaries/Cm-FCC.xsf",
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"convergence": "unaries/Cm-FCC.xsf"
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},
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"Bk": {
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"bands": "unaries/Bk_FCC.cif",
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"convergence": "unaries/Bk_FCC.cif"
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"bands": "unaries/Bk-FCC.xsf",
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"convergence": "unaries/Bk-FCC.xsf"
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},
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"Cf": {
384-
"bands": "unaries/Cf_FCC.cif",
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"convergence": "unaries/Cf_FCC.cif"
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"bands": "unaries/Cf-FCC.xsf",
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"convergence": "unaries/Cf-FCC.xsf"
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},
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"Es": {
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"bands": "unaries/Es_FCC.cif",
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"convergence": "unaries/Es_FCC.cif"
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"bands": "unaries/Es-FCC.xsf",
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"convergence": "unaries/Es-FCC.xsf"
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},
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"Fm": {
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"bands": "unaries/Fm_FCC.cif",
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"convergence": "unaries/Fm_FCC.cif"
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"bands": "unaries/Fm-FCC.xsf",
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"convergence": "unaries/Fm-FCC.xsf"
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},
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"Md": {
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"bands": "unaries/Md_FCC.cif",
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"convergence": "unaries/Md_FCC.cif"
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"bands": "unaries/Md-FCC.xsf",
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"convergence": "unaries/Md-FCC.xsf"
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},
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"No": {
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"bands": "unaries/No_FCC.cif",
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"convergence": "unaries/No_FCC.cif"
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"bands": "unaries/No-FCC.xsf",
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"convergence": "unaries/No-FCC.xsf"
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},
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"Lr": {
404-
"bands": "unaries/Lr_FCC.cif",
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"convergence": "unaries/Lr_FCC.cif"
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"bands": "unaries/Lr-FCC.xsf",
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"convergence": "unaries/Lr-FCC.xsf"
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},
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"Fr": {
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"bands": "unaries/Fr_FCC.cif",
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"convergence": "unaries/Fr_FCC.cif"
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"bands": "unaries/Fr-FCC.xsf",
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"convergence": "unaries/Fr-FCC.xsf"
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},
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"Ra": {
412-
"bands": "unaries/Ra_FCC.cif",
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"convergence": "unaries/Ra_FCC.cif"
412+
"bands": "unaries/Ra-FCC.xsf",
413+
"convergence": "unaries/Ra-FCC.xsf"
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}
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}

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