DESCRIPTION

Package: ggsc
Title: Visualizing Single Cell and Spatial Transcriptomics
Version: 1.5.0
Authors@R: c(
       person("Guangchuang", "Yu", 
              email = "guangchuangyu@gmail.com", 
              role = c("aut", "cre", "cph"), 
              comment = c(ORCID = "0000-0002-6485-8781")
       ),
       person("Shuangbin", "Xu",
              email = "xshuangbin@163.com",      
              role = "aut", 
              comment = c(ORCID="0000-0003-3513-5362")
       ),
       person("Noriaki", "Sato", 
              email = "nori@hgc.jp", 
              role = "ctb")
  )
Description: Useful functions to visualize single cell and spatial 
  data. It supports visualizing 'Seurat', 'SingleCellExperiment' and 'SpatialExperiment' objects through grammar of graphics syntax implemented in 'ggplot2'.
Imports:
  Rcpp,
  RcppParallel,
  cli,
  dplyr,
  ggfun (>= 0.1.5),
  ggplot2,
  grDevices,
  grid,
  methods,
  rlang,
  scattermore,
  stats,
  Seurat,
  SingleCellExperiment,
  SummarizedExperiment,
  tidydr,
  tidyr,
  tibble,
  utils,
  RColorBrewer,
  yulab.utils,
  scales
Suggests:
  aplot,
  BiocParallel,
  forcats,
  ggforce,
  ggnewscale,
  igraph,
  knitr,
  ks,
  Matrix,
  prettydoc,
  rmarkdown,
  scran,
  scater,
  scatterpie (>= 0.2.4),
  scuttle,
  shadowtext,
  sf,
  SeuratObject,
  SpatialExperiment,
  STexampleData,
  testthat (>= 3.0.0),
  MASS
BugReports: https://github.com/YuLab-SMU/ggsc/issues 
URL: https://github.com/YuLab-SMU/ggsc (devel), https://yulab-smu.top/ggsc/ (docs)
biocViews: DimensionReduction, GeneExpression, SingleCell, 
  Software, Spatial, Transcriptomics,Visualization
VignetteBuilder: knitr
SystemRequirements: GNU make
ByteCompile: true
License: Artistic-2.0
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Config/testthat/edition: 3
LinkingTo: 
  Rcpp,
  RcppArmadillo,
  RcppParallel
Remotes:
  YuLab-SMU/SVP