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I noticed this project leverages Aspera to help download IDR data. In searching through documentation and image.sc forum posts, I came across this IDR download instructions page, which indicates you can now use anonymous FTP access for downloading IDR data. It might be helpful to move over to this approach, especially as there are built-in FTP clients within Python. The advantage of reducing code-complexity here might need to be balanced with Aspera's download performance considerations (if it's faster than FTP).
May relate / overlap with efforts in #4 (S3-based access of IDR resources).
For example:
fromftplibimportFTP# Connect to the FTP serverwithFTP("ftp.ebi.ac.uk") asftp:
# Log in to the FTP serverftp.login(user="anonymous", passwd="")
# Change to the desired directory (optional)ftp.cwd("/pub/databases/IDR")
# List directoriesdirs= []
ftp.dir(dirs.append)
# Print the list of directoriesprint("Directories on FTP server:")
fordir_infoindirs:
print(dir_info)
The text was updated successfully, but these errors were encountered:
I noticed this project leverages Aspera to help download IDR data. In searching through documentation and image.sc forum posts, I came across this IDR download instructions page, which indicates you can now use anonymous FTP access for downloading IDR data. It might be helpful to move over to this approach, especially as there are built-in FTP clients within Python. The advantage of reducing code-complexity here might need to be balanced with Aspera's download performance considerations (if it's faster than FTP).
May relate / overlap with efforts in #4 (S3-based access of IDR resources).
For example:
The text was updated successfully, but these errors were encountered: