Adding more info to the chemical pages

WDscholia · Aug 19, 2024 · d255bbd · d255bbd
1 parent 9eb28f3
commit d255bbd
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diff --git a/scholia/app/templates/chemical.html b/scholia/app/templates/chemical.html
@@ -10,6 +10,8 @@
 {{ sparql_to_table('related') }}
 {{ sparql_to_table('recent-literature') }}
 {{ sparql_to_iframe('publications-per-year') }}
+{{ sparql_to_table('biological-processes') }}
+{{ sparql_to_table('found-in-matrix-np') }}
 {{ sparql_to_table('found-in-taxon') }}
 
 {% endblock %}
@@ -66,6 +68,14 @@ <h2 id="publications-per-year">Publications per year</h2>
   <iframe class="embed-responsive-item" id="publications-per-year-iframe" ></iframe>
 </div>
 
+<h2 id="biological-processes">Biological processes in which the chemical is involved</h2>
+
+<table class="table table-hover" id="biological-processes-table"></table>
+
+<h2 id="found-in-matrix-np">Matrices that are natural products of taxa in which the chemical was found</h2>
+
+<table class="table table-hover" id="found-in-matrix-np-table"></table>
+
 <h2 id="found-in-taxon">Taxa in which the chemical was found</h2>
 
 <table class="table table-hover" id="found-in-taxon-table"></table>

diff --git a/scholia/app/templates/chemical_biological-processes.sparql b/scholia/app/templates/chemical_biological-processes.sparql
@@ -0,0 +1,10 @@
+PREFIX target: <http://www.wikidata.org/entity/{{ q }}>
+
+SELECT DISTINCT ?pathway ?pathwayLabel (CONCAT("/pathway/", SUBSTR(STR(?pathway), 32)) AS ?pathwayUrl) WHERE {
+  VALUES ?chemical { target: }
+  ?chemical wdt:P361 ?pathway.
+  ?pathway wdt:P527 ?chemical.
+  ?pathway wdt:P31 wd:Q2996394.
+  SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }
+} ORDER BY ASC(?pathwayLabel)
+  LIMIT 250
diff --git a/scholia/app/templates/chemical_found-in-matrix-np.sparql b/scholia/app/templates/chemical_found-in-matrix-np.sparql
@@ -0,0 +1,10 @@
+PREFIX target: <http://www.wikidata.org/entity/{{ q }}>
+
+SELECT DISTINCT ?matrix ?matrixLabel ?taxon ?taxonLabel (CONCAT("/taxon/", SUBSTR(STR(?taxon), 32)) AS ?taxonUrl) WHERE {
+  VALUES ?chemical { target: }
+  ?chemical wdt:P361 ?matrix.
+  ?matrix (wdt:P279*/wdt:P1582) ?taxon .
+  ?matrix wdt:P527 ?chemical.
+  SERVICE wikibase:label { bd:serviceParam wikibase:language "[AUTO_LANGUAGE],en". }
+} ORDER BY ASC(?taxonLabel)
+  LIMIT 250