Dockerfile

# tagged version, not latest! 
FROM rocker/geospatial:3.5.2 

# install node and npm (see https://nodejs.org/en/download/package-manager/#debian-and-ubuntu-based-linux-distributions)
RUN sudo apt-get install -y curl &&\
  sudo apt-get install -y gnupg &&\
  curl -sL https://deb.nodesource.com/setup_10.x | sudo -E bash - &&\
  sudo apt-get update &&\
  sudo apt-get install -y nodejs &&\
  sudo apt-get install -y build-essential

RUN sudo npm install -g\
  webpack\
  webpack-cli\
  d3-geo-projection

#bring in DOI root cert.  Remove this statement for non-USGS persons
RUN /usr/bin/wget -O /usr/lib/ssl/certs/DOIRootCA.crt http://sslhelp.doi.net/docs/DOIRootCA2.cer && \
	ln -sf /usr/lib/ssl/certs/DOIRootCA.crt /usr/lib/ssl/certs/`openssl x509 -hash -noout -in /usr/lib/ssl/certs/DOIRootCA.crt`.0 && \
	echo "\\n\\nca-certificate = /usr/lib/ssl/certs/DOIRootCA.crt" >> /etc/wgetrc;

RUN Rscript -e 'installed.packages()'
#Note that version rocker images are already set up to use the MRAN mirror corresponding to the 
#date of the R version, so package dates are already set (unless forcing another repo)
RUN Rscript -e  'devtools::install_github("richfitz/remake")' && \
    Rscript -e  'install.packages("grithub", repos = c(getOption("repos"), "https://owi.usgs.gov/R"))' && \
    Rscript -e 	'devtools::install_github("USGS-VIZLAB/vizlab@v0.3.11")' 
    #note that most common packages will already be installed as part of the geospatial image	
RUN    install2.r --error \
	sbtools \
	geojsonio \
	dataRetrieval\
	bit64
	 		                    
RUN mkdir /home/rstudio/gage-conditions
RUN chown rstudio /home/rstudio/gage-conditions
WORKDIR /home/rstudio/gage-conditions