From a0df6bda6222c5d8f55236af252dd3bbbe37e0f0 Mon Sep 17 00:00:00 2001 From: ravinpoudel Date: Thu, 28 Oct 2021 21:12:45 -0400 Subject: [PATCH] altair version added --- docker-images/nonavx/Dockerfile | 2 +- docker-images/webapp/Dockerfile | 6 +++++- setup.py | 2 +- 3 files changed, 7 insertions(+), 3 deletions(-) diff --git a/docker-images/nonavx/Dockerfile b/docker-images/nonavx/Dockerfile index e5f0a5c..9dd7e11 100644 --- a/docker-images/nonavx/Dockerfile +++ b/docker-images/nonavx/Dockerfile @@ -16,7 +16,7 @@ RUN conda install --yes --channel conda-forge --channel bioconda --freeze-instal python=3.7 \ pandas=1.0.3 \ pybedtools \ - biopython=1.76 \ + biopython=1.79 \ numpy=1.19.4 \ pyyaml=5.4.1 \ nmslib \ diff --git a/docker-images/webapp/Dockerfile b/docker-images/webapp/Dockerfile index 0a364cc..83b8cb7 100644 --- a/docker-images/webapp/Dockerfile +++ b/docker-images/webapp/Dockerfile @@ -13,7 +13,11 @@ SHELL ["/bin/bash", "--login", "-c"] RUN conda install --yes --channel conda-forge --channel bioconda --channel gagan3012 --freeze-installed \ nomkl \ python=3.7 \ - pybedtools=0.8.2 \ + pandas=1.0.3 \ + pybedtools \ + biopython=1.79 \ + numpy=1.19.4 \ + pyyaml=5.4.1 \ && conda clean -afy RUN pip install --no-binary :all: nmslib diff --git a/setup.py b/setup.py index 73f1266..2b41a33 100644 --- a/setup.py +++ b/setup.py @@ -14,7 +14,7 @@ 'pandas>=1.0.0', 'pyyaml>=5.4.1', 'regex==2020.11.13', - 'altair', + 'altair==4.1.0', 'streamlit>=0.86.0', 'pytest>=4.6', 'pytest-cov',