{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":445283507,"defaultBranch":"main","name":"General_LW_scripts","ownerLogin":"UPHL-BioNGS","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2022-01-06T19:13:50.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/38733771?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1725901935.0","currentOid":""},"activityList":{"items":[{"before":"800f91030e51285298a3a1a549072f22e0ebf836","after":"5ca3d015883aa0cac5e3083ba47e5d24f5e9c5f0","ref":"refs/heads/grand_size_check","pushedAt":"2024-09-09T17:12:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"Checks files size","shortMessageHtmlLink":"Checks files size"}},{"before":null,"after":"800f91030e51285298a3a1a549072f22e0ebf836","ref":"refs/heads/grand_size_check","pushedAt":"2024-09-09T17:12:15.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"Merge pull request #47 from UPHL-BioNGS/hot_fix_covid_accession\n\nUpdate accession_for_clarity.py","shortMessageHtmlLink":"Merge pull request #47 from UPHL-BioNGS/hot_fix_covid_accession"}},{"before":"9f07acabdb97ada2437669176a29b4fa56e11b11","after":null,"ref":"refs/heads/erin-updates","pushedAt":"2024-09-09T17:11:55.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":"2296e09ea4ae5697618d9af7131ce17f28ef0ad0","after":"800f91030e51285298a3a1a549072f22e0ebf836","ref":"refs/heads/main","pushedAt":"2024-08-28T16:41:50.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"jwarnn","name":"John Arnn","path":"/jwarnn","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/72882088?s=80&v=4"},"commit":{"message":"Merge pull request #47 from UPHL-BioNGS/hot_fix_covid_accession\n\nUpdate accession_for_clarity.py","shortMessageHtmlLink":"Merge pull request #47 from UPHL-BioNGS/hot_fix_covid_accession"}},{"before":"2296e09ea4ae5697618d9af7131ce17f28ef0ad0","after":"925c31b020cf5993278b30a04414af14ae5d967e","ref":"refs/heads/hot_fix_covid_accession","pushedAt":"2024-08-28T15:03:05.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jwarnn","name":"John Arnn","path":"/jwarnn","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/72882088?s=80&v=4"},"commit":{"message":"Update accession_for_clarity.py","shortMessageHtmlLink":"Update accession_for_clarity.py"}},{"before":null,"after":"2296e09ea4ae5697618d9af7131ce17f28ef0ad0","ref":"refs/heads/hot_fix_covid_accession","pushedAt":"2024-08-28T15:01:05.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"jwarnn","name":"John Arnn","path":"/jwarnn","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/72882088?s=80&v=4"},"commit":{"message":"Merge pull request #43 from UPHL-BioNGS/erin-updates\n\nErin updates","shortMessageHtmlLink":"Merge pull request #43 from UPHL-BioNGS/erin-updates"}},{"before":"8269a4b898054ddd37f485b50041b038768e8e1c","after":"2296e09ea4ae5697618d9af7131ce17f28ef0ad0","ref":"refs/heads/main","pushedAt":"2024-08-26T21:19:49.000Z","pushType":"pr_merge","commitsCount":26,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"Merge pull request #43 from UPHL-BioNGS/erin-updates\n\nErin updates","shortMessageHtmlLink":"Merge pull request #43 from UPHL-BioNGS/erin-updates"}},{"before":"71d3fa61c6d501658057923567ea58350029aa9f","after":"9f07acabdb97ada2437669176a29b4fa56e11b11","ref":"refs/heads/erin-updates","pushedAt":"2024-08-23T20:23:21.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"sort fastq files","shortMessageHtmlLink":"sort fastq files"}},{"before":"495ffe99de7c81f64bab4fe0eaae61f8a844193a","after":null,"ref":"refs/heads/add_nxf_version","pushedAt":"2024-07-19T15:58:36.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":"3fbc219eeefa52935bbc09316eddb4c886ad13a5","after":null,"ref":"refs/heads/RSummary","pushedAt":"2024-07-19T15:58:35.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":"6e366107eb9ec2837cb895292544d134750d7e58","after":null,"ref":"refs/heads/grandeur_V3","pushedAt":"2024-07-19T15:58:35.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":"ef5322263d1bbdec205765190406b540253932b7","after":null,"ref":"refs/heads/remove_run_json","pushedAt":"2024-07-19T15:58:34.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":"be717ca9687dc7a496e928378c560b51120bf6c0","after":null,"ref":"refs/heads/erin-rsummary","pushedAt":"2024-07-19T15:58:33.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":"964c4348b52c98b786887230ed1337d82c2e870f","after":null,"ref":"refs/heads/erin-dev","pushedAt":"2024-07-19T15:58:32.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":"34a734667e9041b318e0468fce0c81a047104b98","after":null,"ref":"refs/heads/find_coviseqcomplete","pushedAt":"2024-07-19T15:58:31.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":"17b8042498fa4c7bec28419100d9ff38243cd0de","after":null,"ref":"refs/heads/erin-add-grandeur-summary","pushedAt":"2024-07-19T15:58:26.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"}},{"before":null,"after":"251cac309feba168f752e3d269ad2354aef40d48","ref":"refs/heads/erin-df-sample-sheet","pushedAt":"2024-07-15T22:35:08.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"initial df scripts","shortMessageHtmlLink":"initial df scripts"}},{"before":"f63274431eae647c67670b1df8ecd048f00b097f","after":"6215a89381b94142a752ccab286c2d43321c6172","ref":"refs/heads/download_from_run","pushedAt":"2024-07-15T18:16:16.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"fixed ecoli shigella serotyping","shortMessageHtmlLink":"fixed ecoli shigella serotyping"}},{"before":null,"after":"6c4850c30a4e81d015fc6d87e2830e24174fc2bc","ref":"refs/heads/aws_upload_download","pushedAt":"2024-07-12T22:19:29.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"python scripts for s3","shortMessageHtmlLink":"python scripts for s3"}},{"before":"06c6ca270cfb2809ef3336deb948fbdbccef297a","after":"f63274431eae647c67670b1df8ecd048f00b097f","ref":"refs/heads/download_from_run","pushedAt":"2024-07-12T22:09:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"uploading and downloading from aws","shortMessageHtmlLink":"uploading and downloading from aws"}},{"before":"93335b628d95cca4ff9118122ca7d895ca208e14","after":"71d3fa61c6d501658057923567ea58350029aa9f","ref":"refs/heads/erin-updates","pushedAt":"2024-07-12T19:13:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"added return","shortMessageHtmlLink":"added return"}},{"before":"88d787db9f4dbf24c3572bb8c5b104576a732c97","after":"93335b628d95cca4ff9118122ca7d895ca208e14","ref":"refs/heads/erin-updates","pushedAt":"2024-07-12T18:58:13.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"added blank lines","shortMessageHtmlLink":"added blank lines"}},{"before":"4132d58a5e1a97c631dae0b9e844f365cb5a7b7c","after":"88d787db9f4dbf24c3572bb8c5b104576a732c97","ref":"refs/heads/erin-updates","pushedAt":"2024-07-12T18:37:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"fixed path for sample sheet","shortMessageHtmlLink":"fixed path for sample sheet"}},{"before":"e76f2806d294e8629cb943d61963d867ca6d9613","after":"4132d58a5e1a97c631dae0b9e844f365cb5a7b7c","ref":"refs/heads/erin-updates","pushedAt":"2024-07-12T18:23:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"fixed missing f","shortMessageHtmlLink":"fixed missing f"}},{"before":"34d873e003aaa5ec725228f72811382d2df294fc","after":"06c6ca270cfb2809ef3336deb948fbdbccef297a","ref":"refs/heads/download_from_run","pushedAt":"2024-07-12T18:20:22.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"added usage for grandeur_to_sheets.py","shortMessageHtmlLink":"added usage for grandeur_to_sheets.py"}},{"before":"689f00e15086cd8a86f6da78e2972eaf6cd9a024","after":"e76f2806d294e8629cb943d61963d867ca6d9613","ref":"refs/heads/erin-updates","pushedAt":"2024-07-12T16:19:31.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"changed config file to have date included","shortMessageHtmlLink":"changed config file to have date included"}},{"before":"40d75f19b806baed45418aae41ea4ad67b309016","after":"689f00e15086cd8a86f6da78e2972eaf6cd9a024","ref":"refs/heads/erin-updates","pushedAt":"2024-07-11T23:10:14.000Z","pushType":"push","commitsCount":6,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"separate file for getting a df","shortMessageHtmlLink":"separate file for getting a df"}},{"before":"562b9355bbbbeaeaf2550fbe2f45a58ea79b6f69","after":"34d873e003aaa5ec725228f72811382d2df294fc","ref":"refs/heads/download_from_run","pushedAt":"2024-07-11T19:06:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"adjusted to functions","shortMessageHtmlLink":"adjusted to functions"}},{"before":null,"after":"562b9355bbbbeaeaf2550fbe2f45a58ea79b6f69","ref":"refs/heads/download_from_run","pushedAt":"2024-07-09T18:41:04.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"separate functions for reading sample sheets","shortMessageHtmlLink":"separate functions for reading sample sheets"}},{"before":"8ac5bcca021d1e70d2cf2e968bd981ddca86dd63","after":"40d75f19b806baed45418aae41ea4ad67b309016","ref":"refs/heads/erin-updates","pushedAt":"2024-07-09T15:53:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"erinyoung","name":"Young","path":"/erinyoung","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/28793649?s=80&v=4"},"commit":{"message":"fix typo","shortMessageHtmlLink":"fix typo"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0wOVQxNzoxMjo0NC4wMDAwMDBazwAAAASxKsxc","endCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wNy0wOVQxNTo1Mzo1Ni4wMDAwMDBazwAAAAR627s8"}},"title":"Activity ยท UPHL-BioNGS/General_LW_scripts"}