diff --git a/modules/pangolin.nf b/modules/pangolin.nf index 276064a..dbc0adb 100644 --- a/modules/pangolin.nf +++ b/modules/pangolin.nf @@ -2,7 +2,7 @@ process pangolin { tag "SARS-CoV-2 lineage Determination" label "process_medium" publishDir path: params.outdir, mode: 'copy', saveAs: { filename -> filename.equals('versions.yml') ? null : filename } - container 'staphb/pangolin:4.3.1-pdata-1.26' + container 'staphb/pangolin:4.3.1-pdata-1.27' //#UPHLICA maxForks 10 //#UPHLICA errorStrategy { task.attempt < 2 ? 'retry' : 'ignore'} diff --git a/nextflow.config b/nextflow.config index d2eaede..50d5ab2 100644 --- a/nextflow.config +++ b/nextflow.config @@ -5,7 +5,7 @@ manifest { name = 'Cecret' author = 'Erin Young' homePage = 'https://github.com/UPHL-BioNGS/Cecret' - version = 'v3.13.20240430' + version = 'v3.13.20240507' defaultBranch = 'master' recurseSubmodules = false description = 'Reference-based consensus creation'