-
Notifications
You must be signed in to change notification settings - Fork 30
252 lines (235 loc) · 10.1 KB
/
check-and-build.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
name: Build images and test algorithms
on:
pull_request:
branches: main
push:
branches: main
defaults:
run:
shell: 'bash -Eeuo pipefail -l {0}'
jobs:
init:
name: Generate Jobs
runs-on: ubuntu-latest
outputs:
base_matrix: ${{ steps.generate-jobs.outputs.base_matrix }}
intermediate_matrix: ${{ steps.generate-jobs.outputs.intermediate_matrix }}
algo_matrix: ${{ steps.generate-jobs.outputs.algo_matrix }}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 3
- id: generate-jobs
name: Generate Jobs for modified base images or algorithms
run: |
base_matrix="$(./.ci/generate-build-matrix.sh 0-base-images)"
echo "base_matrix=$base_matrix" >> "$GITHUB_OUTPUT"
jq . <<<"$base_matrix" # print generated json for debugging
intermediate_matrix="$(./.ci/generate-build-matrix.sh 1-intermediate-images)"
echo "intermediate_matrix=$intermediate_matrix" >> "$GITHUB_OUTPUT"
jq . <<<"$intermediate_matrix" # print generated json for debugging
algo_matrix="$(./.ci/generate-build-matrix.sh)"
echo "algo_matrix=$algo_matrix" >> "$GITHUB_OUTPUT"
jq . <<<"$algo_matrix" # print generated json for debugging
build-base-images:
name: Build base images
runs-on: ubuntu-latest
needs: init
permissions:
contents: read
packages: write
if: fromJson(needs.init.outputs.base_matrix).algorithm_name[0] != null
strategy:
max-parallel: 3
matrix: ${{ fromJson(needs.init.outputs.base_matrix) }}
fail-fast: false
steps:
- uses: actions/checkout@v4
- name: Compute (and check) version
id: version
run: |
version="$(./.ci/get-image-version.sh 0-base-images/${{ matrix.algorithm_name }})"
echo "version=$version" >> "$GITHUB_OUTPUT"
echo "$version"
- name: Compute Docker metadata
id: meta
uses: docker/metadata-action@v5
with:
images: ghcr.io/timeeval/${{ matrix.algorithm_name }}
tags: |
type=raw,value=latest
type=raw,value=${{ steps.version.outputs.version }}
labels: |
org.opencontainers.image.licenses=MIT
org.opencontainers.image.title=TimeEval ${{ matrix.algorithm_name }} base image
org.opencontainers.image.version=${{ steps.version.outputs.version }}
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
- name: Login to registry
if: github.event_name != 'pull_request'
uses: docker/login-action@v3
with:
registry: ghcr.io
username: ${{ github.repository_owner }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Build algorithm image
uses: docker/build-push-action@v5
with:
context: "./0-base-images/${{ matrix.algorithm_name }}"
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
pull: true
push: ${{ github.event_name != 'pull_request' }}
cache-from: type=gha
cache-to: type=gha,mode=max
build-intermediate-images:
name: Build intermediate images
runs-on: ubuntu-latest
needs: init
permissions:
contents: read
packages: write
if: fromJson(needs.init.outputs.intermediate_matrix).algorithm_name[0] != null
strategy:
max-parallel: 3
matrix: ${{ fromJson(needs.init.outputs.intermediate_matrix) }}
fail-fast: false
steps:
- uses: actions/checkout@v4
- name: Compute (and check) version
id: version
run: |
version="$(./.ci/get-image-version.sh 1-intermediate-images/${{ matrix.algorithm_name }})"
echo "version=$version" >> "$GITHUB_OUTPUT"
echo "$version"
- name: Compute Docker metadata
id: meta
uses: docker/metadata-action@v5
with:
images: ghcr.io/timeeval/${{ matrix.algorithm_name }}
tags: |
type=raw,value=latest
type=raw,value=${{ steps.version.outputs.version }}
labels: |
org.opencontainers.image.licenses=MIT
org.opencontainers.image.title=TimeEval ${{ matrix.algorithm_name }} intermediate image
org.opencontainers.image.version=${{ steps.version.outputs.version }}
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
- name: Login to registry
if: github.event_name != 'pull_request'
uses: docker/login-action@v3
with:
registry: ghcr.io
username: ${{ github.repository_owner }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Build algorithm image
uses: docker/build-push-action@v5
with:
context: "./1-intermediate-images/${{ matrix.algorithm_name }}"
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
pull: true
push: ${{ github.event_name != 'pull_request' }}
cache-from: type=gha
cache-to: type=gha,mode=max
test-algorithms:
name: Build and test algorithm images
runs-on: ubuntu-latest
needs:
- init
permissions:
contents: read
packages: write
if: fromJson(needs.init.outputs.algo_matrix).algorithm_name[0] != null
strategy:
max-parallel: 3
matrix: ${{ fromJson(needs.init.outputs.algo_matrix) }}
fail-fast: false
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.10
uses: actions/setup-python@v4
with:
python-version: "3.10"
- name: Validate manifest
run: python validate_manifest.py --path ${{ matrix.algorithm_name }}/manifest.json
- name: Determine correct test dataset
id: dataset
run: |
dataset_name="$(python .ci/get_dataset_name.py ${{ matrix.algorithm_name }})"
echo "dataset_name=$dataset_name" >> "$GITHUB_OUTPUT"
echo "$dataset_name"
- name: Compute (and check) version
id: version
run: |
version="$(./.ci/get-image-version.sh ${{ matrix.algorithm_name }})"
echo "version=$version" >> "$GITHUB_OUTPUT"
echo "$version"
- name: Compute Docker metadata
id: meta
uses: docker/metadata-action@v5
with:
images: ghcr.io/timeeval/${{ matrix.algorithm_name }}
tags: |
type=raw,value=latest
type=raw,value=${{ steps.version.outputs.version }}
labels: |
org.opencontainers.image.title=TimeEval algorithm ${{ matrix.algorithm_name }}
org.opencontainers.image.version=${{ steps.version.outputs.version }}
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v3
- name: Build algorithm image
uses: docker/build-push-action@v5
with:
context: "./${{ matrix.algorithm_name }}"
tags: ${{ steps.meta.outputs.tags }}
# filter out license label, because it is set in the Dockerfile
labels: |
org.opencontainers.image.title=${{ fromJSON(steps.meta.outputs.json).labels['org.opencontainers.image.title'] }}
org.opencontainers.image.description=${{ fromJSON(steps.meta.outputs.json).labels['org.opencontainers.image.description'] }}
org.opencontainers.image.url=${{ fromJSON(steps.meta.outputs.json).labels['org.opencontainers.image.url'] }}
org.opencontainers.image.source=${{ fromJSON(steps.meta.outputs.json).labels['org.opencontainers.image.source'] }}
org.opencontainers.image.version=${{ fromJSON(steps.meta.outputs.json).labels['org.opencontainers.image.version'] }}
org.opencontainers.image.created=${{ fromJSON(steps.meta.outputs.json).labels['org.opencontainers.image.created'] }}
org.opencontainers.image.revision=${{ fromJSON(steps.meta.outputs.json).labels['org.opencontainers.image.revision'] }}
pull: true
load: true
push: false
cache-from: type=gha
cache-to: type=gha,mode=max
- name: Check if manifest is in the container
run: docker run --rm -e LOCAL_UID=1000 -e LOCAL_GID=1000 "ghcr.io/timeeval/${{ matrix.algorithm_name }}:latest" manifest
- name: Fix permissions of result folder
run: |
mkdir -p results
chmod 777 results
- name: Test training call
run: |
docker run --rm -e LOCAL_UID=1000 -e LOCAL_GID=1000 -v "${{ steps.dataset.outputs.dataset_name}}:/data/dataset.csv:ro" -v "$(pwd)/results:/results:rw" "ghcr.io/timeeval/${{ matrix.algorithm_name }}:latest" execute-algorithm '{"dataInput": "/data/dataset.csv", "dataOutput": "/results/scores.csv", "modelInput": "/results/model.pkl", "modelOutput": "/results/model.pkl", "executionType": "train", "customParameters": {"epochs": 1}}'
- name: Test execution call
run: |
docker run --rm -e LOCAL_UID=1000 -e LOCAL_GID=1000 -v "${{ steps.dataset.outputs.dataset_name}}:/data/dataset.csv:ro" -v "$(pwd)/results:/results:rw" "ghcr.io/timeeval/${{ matrix.algorithm_name }}:latest" execute-algorithm '{"dataInput": "/data/dataset.csv", "dataOutput": "/results/scores.csv", "modelInput": "/results/model.pkl", "modelOutput": "/results/model.pkl", "executionType": "execute", "customParameters": {"epochs": 1}}'
- name: Validate output
run: |
ls -alh results/*
python .ci/check_output.py "${{ matrix.algorithm_name }}"
# deployment for non-PRs and if all checks are successfull:
- name: Login to registry
if: github.event_name != 'pull_request'
uses: docker/login-action@v3
with:
registry: ghcr.io
username: ${{ github.repository_owner }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Build and push algorithm image
if: github.event_name != 'pull_request'
uses: docker/build-push-action@v5
with:
context: "./${{ matrix.algorithm_name }}"
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}
load: false
push: true
cache-from: type=gha
cache-to: type=gha,mode=max