actions.yaml

name: Test

on: [push, pull_request]

jobs:
  # Run CLI test and pytest
  test:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        python-version: ["3.10", "3.11", "3.12"]
        resolution: ["highest", "lowest-direct"]

    steps:
      # Checkout the code
      - uses: actions/checkout@v4
      # Install uv
      - name: Install uv
        run: curl -LsSf https://astral.sh/uv/0.4.0/install.sh | sh
      # Test whether the CLI is working
      - name: Test CLI
        run: uv run -p ${{ matrix.python-version }} --resolution ${{ matrix.resolution }}  seml
      # Test with pytest
      - name: Test with pytest
        run: |
          cd test
          uv run -p ${{ matrix.python-version }} --resolution ${{ matrix.resolution }} pytest

  # Test commands in a dummy environment
  commands:
    runs-on: ubuntu-22.04 # this is the lastest release supported by MongoDB
    strategy:
      fail-fast: false
      matrix:
        python-version: ["3.10", "3.11", "3.12"]
        resolution: ["highest", "lowest-direct"]
    # MySQL for Slurm
    services:
      mysql:
        image: mysql:8.0
        env:
          MYSQL_ROOT_PASSWORD: root
        ports:
          - "8888:3306"
        options: --health-cmd="mysqladmin ping" --health-interval=10s --health-timeout=5s --health-retries=3

    steps:
      - name: Start MongoDB
        uses: supercharge/mongodb-github-action@1.11.0
        with:
          mongodb-username: admin
          mongodb-password: admin
          mongodb-port: 27017
      - name: Install mongosh
        run: |
          sudo apt-get install gnupg
          wget -qO- https://www.mongodb.org/static/pgp/server-7.0.asc | sudo tee /etc/apt/trusted.gpg.d/server-7.0.asc
          echo "deb [ arch=amd64,arm64 ] https://repo.mongodb.org/apt/ubuntu focal/mongodb-org/7.0 multiverse" | sudo tee /etc/apt/sources.list.d/mongodb-org-7.0.list
          sudo apt-get update
          sudo apt-get install -y mongodb-mongosh
          mongosh --version
      - name: Create seml MongoDB user
        run: |
          mongosh --host localhost:27017 -u admin -p admin --authenticationDatabase admin <<EOF
            db = db.getSiblingDB('seml');
            db.createUser({ user: 'seml', pwd: 'seml', roles: [{ role: 'readWrite', db: 'seml' }] });
          EOF
      - name: Setup Slurm Cluster
        uses: koesterlab/setup-slurm-action@v1
      # Checkout the code
      - uses: actions/checkout@v4
      - name: Install uv
        run: curl -LsSf https://astral.sh/uv/0.4.0/install.sh | sh
      - name: Setup virtual env
        run: uv sync
      - name: Setup seml config
        run: uv run seml configure --host=localhost --port=27017 --database=seml --username=seml --password=seml
      - name: Add
        run: uv run seml test_collection add ci/examples/example_config.yaml
      - name: Start
        run: uv run seml test_collection start
      - name: Hold
        run: uv run seml test_collection hold
      - name: Release
        run: uv run seml test_collection release
      - name: Status
        run: uv run seml test_collection status
      - name: Queue
        run: uv run seml queue
      - name: Cancel
        run: uv run seml test_collection cancel -y
      - name: Delete
        run: uv run seml test_collection delete -y
      - name: Reload sources
        run: uv run seml test_collection add ci/examples/example_config.yaml reload-sources -y
      - name: Set description
        run: uv run seml test_collection description set -y 'Hello World ${config.dataset}!'
      - name: List description
        run: uv run seml test_collection description list
      - name: Delete description
        run: uv run seml test_collection description delete -y
      - name: List
        run: uv run seml list