Can't compile

[theo-allnutt-bioinformatics]

Hi,

unfortunately I cannot use conda on the HPC I am using. When compiling I get the following error:

/bin/ld: cannot find -lstdc++
collect2: error: ld returned 1 exit status
make[4]: *** [Makefile:1156: bin/kat_jellyfish] Error 1
make[4]: Leaving directory '/g/data/nm31/bin/KAT/deps/jellyfish-2.2.0'
make[3]: *** [Makefile:1867: all-recursive] Error 1
make[3]: Leaving directory '/g/data/nm31/bin/KAT/deps/jellyfish-2.2.0'
make[2]: *** [Makefile:901: all] Error 2
make[2]: Leaving directory '/g/data/nm31/bin/KAT/deps/jellyfish-2.2.0'
make[1]: *** [Makefile:475: all-recursive] Error 1
make[1]: Leaving directory '/g/data/nm31/bin/KAT'
make: *** [Makefile:399: all] Error 2

[tallnuttrbgv]

Tried this:

edited build_boost.sh and replace '--prefix=build' with '--prefix=/g/data/nm31/bin/KAT'
./build_boost.sh

./autogen.sh

./configure --prefix=/g/data/nm31/bin/KAT

make

And get this error:

Making install in lib
make[1]: Entering directory '/g/data/nm31/bin/KAT/lib'
CXX src/libkat_la-matrix_metadata_extractor.lo
In file included from src/matrix_metadata_extractor.cc:23:
../lib/include/kat/matrix_metadata_extractor.hpp:24:10: fatal error: boost/filesystem/path.hpp: No such file or directory
24 | #include <boost/filesystem/path.hpp>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
make[1]: *** [Makefile:551: src/libkat_la-matrix_metadata_extractor.lo] Error 1
make[1]: Leaving directory '/g/data/nm31/bin/KAT/lib'
make: *** [Makefile:475: install-recursive] Error 1