diff --git a/CITATION.cff b/CITATION.cff index bc04283..1768646 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -1,13 +1,33 @@ +# This CITATION.cff file was generated with cffinit. +# Visit https://bit.ly/cffinit to generate yours today! + cff-version: 1.2.0 -message: If you find LDWeaver helpful, please cite it as below. -type: article - authors: - name: "Mallawaarachchi, Sudaraka et al." - orcid: "https://orcid.org/0000-0001-8899-3323" -title: "LDWeaver" -version: 1.4 -doi: "https://doi.org/10.1101/2023.08.04.551407" -article: "bioRxiv" -month: August -title: "Detecting co-selection through excess linkage disequilibrium in bacterial genomes" -year: 2023 +title: LDWeaver +message: ' If you find LDWeaver helpful, please cite:' +type: software +authors: + - given-names: Sudaraka + family-names: Mallawa Arachchi + email: smallawaarachchi@gmail.com + orcid: 'https://orcid.org/0000-0001-8899-3323' + affiliation: University of Oslo and University of Melbourne +identifiers: + - type: doi + value: 10.5281/zenodo.10016711 + description: Zenodo +repository-code: 'https://github.com/Sudaraka88/LDWeaver/' +abstract: >- + LDWeaver accepts a sequence alignment (fasta) and its + reference annotation (genbank or gff) as inputs and + identifies linkage disequilibrium (LD) between pairs of + variants (links) that is unusually high given the genomic + distance between the pair. This high LD could be the + result of co-selection or epistasis. +keywords: + - Microbial Genomics + - Linkage Disequilibrium + - Epistasis + - Gene Interactions +license: GPL-3.0-or-later +version: v1.4 +date-released: '2024-01-04'