diff --git a/README.md b/README.md index 176e3620..62af1087 100644 --- a/README.md +++ b/README.md @@ -21,19 +21,19 @@ Built with the [Meltano SDK](https://sdk.meltano.com) for Singer Taps and Target ## Settings | Setting | Required | Default | Description | -| :------------------------------ | :------- | :---------------------------- | :------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | +| :------------------------------ | :------- | :---------------------------- |:---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| | host | False | None | Hostname for postgres instance. Note if sqlalchemy_url is set this will be ignored. | | port | False | 5432 | The port on which postgres is awaiting connection. Note if sqlalchemy_url is set this will be ignored. | | user | False | None | User name used to authenticate. Note if sqlalchemy_url is set this will be ignored. | | password | False | None | Password used to authenticate. Note if sqlalchemy_url is set this will be ignored. | | database | False | None | Database name. Note if sqlalchemy_url is set this will be ignored. | -| sqlalchemy_url | False | None | SQLAlchemy connection string. This will override using host, user, password, port, dialect, and all ssl settings. Note that you must escape password special characters properly. See https://docs.sqlalchemy.org/en/20/core/engines.html#escaping-special-characters-such-as-signs-in-passwords | -| dialect+driver | False | postgresql+psycopg2 | Dialect+driver see https://docs.sqlalchemy.org/en/20/core/engines.html. Generally just leave this alone. Note if sqlalchemy_url is set this will be ignored. | +| sqlalchemy_url | False | None | SQLAlchemy connection string. This will override using host, user, password, port, and all ssl settings. Note that you must escape password special characters properly. See https://docs.sqlalchemy.org/en/20/core/engines.html#escaping-special-characters-such-as-signs-in-passwords | | default_target_schema | False | melty | Postgres schema to send data to, example: tap-clickup | | activate_version | False | 1 | If set to false, the tap will ignore activate version messages. If set to true, add_record_metadata must be set to true as well. | | hard_delete | False | 0 | When activate version is sent from a tap this specefies if we should delete the records that don't match, or mark them with a date in the `_sdc_deleted_at` column. This config option is ignored if `activate_version` is set to false. | | add_record_metadata | False | 1 | Note that this must be enabled for activate_version to work!This adds _sdc_extracted_at, _sdc_batched_at, and more to every table. See https://sdk.meltano.com/en/latest/implementation/record_metadata.html for more information. | | interpret_content_encoding | False | 0 | If set to true, the target will interpret the content encoding of the schema to determine how to store the data. Using this option may result in a more efficient storage of the data but may also result in an error if the data is not encoded as expected. | +| sanitize_null_text_characters | False | 0 | If set to true, the target will sanitize null characters in char/text/varchar fields, as they are not supported by Postgres. See [postgres documentation](https://www.postgresql.org/docs/current/functions-string.html) for more information about chr(0) not being supported. | | ssl_enable | False | 0 | Whether or not to use ssl to verify the server's identity. Use ssl_certificate_authority and ssl_mode for further customization. To use a client certificate to authenticate yourself to the server, use ssl_client_certificate_enable instead. Note if sqlalchemy_url is set this will be ignored. | | ssl_client_certificate_enable | False | 0 | Whether or not to provide client-side certificates as a method of authentication to the server. Use ssl_client_certificate and ssl_client_private_key for further customization. To use SSL to verify the server's identity, use ssl_enable instead. Note if sqlalchemy_url is set this will be ignored. | | ssl_mode | False | verify-full | SSL Protection method, see [postgres documentation](https://www.postgresql.org/docs/current/libpq-ssl.html#LIBPQ-SSL-PROTECTION) for more information. Must be one of disable, allow, prefer, require, verify-ca, or verify-full. Note if sqlalchemy_url is set this will be ignored. | @@ -342,4 +342,4 @@ Example data: { "my_hex": "House" } ``` -For convenience, data prefixed with `0x` or containing an odd number of characters is supported although it's not part of the standard. +For convenience, data prefixed with `0x` or containing an odd number of characters is supported, although it's not part of the standard. diff --git a/poetry.lock b/poetry.lock index e960f013..417e6eb3 100644 --- a/poetry.lock +++ b/poetry.lock @@ -251,101 +251,116 @@ files = [ [[package]] name = "charset-normalizer" -version = "3.3.2" +version = "3.4.0" description = "The Real First Universal Charset Detector. 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[[package]] @@ -1811,4 +1818,4 @@ faker = ["faker"] [metadata] lock-version = "2.0" python-versions = ">=3.8" -content-hash = "559d9bee80d6acf3209e11e89571ee1a1723b3e3af9e93c7d86500cf21ae5888" +content-hash = "7ddd8c4408363934bb6760ea90595e663e712ec8c7d40e208fda46c1c22b8d74" diff --git a/pyproject.toml b/pyproject.toml index 56d884d7..ba8fd1d9 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -34,7 +34,7 @@ packages = [ [tool.poetry.dependencies] python = ">=3.8" faker = {version = "~=30.0", optional = true} -psycopg2-binary = "2.9.9" +psycopg-binary = "3.2.3" sqlalchemy = "~=2.0" sshtunnel = "0.4.0" diff --git a/target_postgres/connector.py b/target_postgres/connector.py index 6ba09b9e..874f156d 100644 --- a/target_postgres/connector.py +++ b/target_postgres/connector.py @@ -97,6 +97,15 @@ def interpret_content_encoding(self) -> bool: """ return self.config.get("interpret_content_encoding", False) + @cached_property + def sanitize_null_text_characters(self) -> bool: + """Whether to sanitize null text characters. + + Returns: + True if the feature is enabled, False otherwise. + """ + return self.config.get("sanitize_null_text_characters", False) + def prepare_table( # type: ignore[override] # noqa: PLR0913 self, full_table_name: str | FullyQualifiedName, @@ -639,7 +648,7 @@ def get_sqlalchemy_url(self, config: dict) -> str: return cast(str, config["sqlalchemy_url"]) sqlalchemy_url = URL.create( - drivername=config["dialect+driver"], + drivername="postgresql+psycopg", username=config["user"], password=config["password"], host=config["host"], @@ -914,4 +923,4 @@ def process_bind_param(self, value, dialect): f"{type(value)} is not supported" ) - return value + return value \ No newline at end of file diff --git a/target_postgres/sinks.py b/target_postgres/sinks.py index f2f9e420..a90d2656 100644 --- a/target_postgres/sinks.py +++ b/target_postgres/sinks.py @@ -119,6 +119,44 @@ def generate_temp_table_name(self): # in postgres, used a guid just in case we are using the same session return f"{str(uuid.uuid4()).replace('-', '_')}" + def generate_copy_statement( + self, + full_table_name: str | FullyQualifiedName, + columns: list[sa.Column], # type: ignore[override] + ) -> str: + """Generate a copy statement for bulk copy. + + Args: + full_table_name: the target table name. + columns: the target table columns. + + Returns: + A copy statement. + """ + columns_list = ", ".join(f'"{column.name}"' for column in columns) + sql: str = f'COPY "{full_table_name}" ({columns_list}) FROM STDIN' + + return sql + + def sanitize_null_text_characters(self, data): + """Sanitizes null characters by replacing \u0000 with \ufffd.""" + + def replace_null_character(d): + return d.replace("\u0000", "\ufffd") + + if isinstance(data, str): + data = replace_null_character(data) + + elif isinstance(data, dict): + for k in data: + if isinstance(data[k], str): + data[k] = replace_null_character(data[k]) + + elif isinstance(data, list): + for i in range(0, len(data)): + if isinstance(data[i], str): + data[i] = replace_null_character(data[i]) + def bulk_insert_records( # type: ignore[override] self, table: sa.Table, @@ -129,51 +167,79 @@ def bulk_insert_records( # type: ignore[override] ) -> int | None: """Bulk insert records to an existing destination table. - The default implementation uses a generic SQLAlchemy bulk insert operation. - This method may optionally be overridden by developers in order to provide - faster, native bulk uploads. - - Args: - table: the target table object. - schema: the JSON schema for the new table, to be used when inferring column - names. - records: the input records. - primary_keys: the primary key columns for the table. - connection: the database connection. - - Returns: - True if table exists, False if not, None if unsure or undetectable. - """ + The default implementation uses a generic SQLAlchemy bulk insert operation. + This method may optionally be overridden by developers in order to provide + faster, native bulk uploads. + + Args: + table: the target table object. + schema: the JSON schema for the new table, to be used when inferring column + names. + records: the input records. + primary_keys: the primary key columns for the table. + connection: the database connection. + + Returns: + True if table exists, False if not, None if unsure or undetectable. + """ columns = self.column_representation(schema) - insert: str = t.cast( - str, - self.generate_insert_statement( - table.name, - columns, - ), - ) - self.logger.info("Inserting with SQL: %s", insert) - # Only one record per PK, we want to take the last one - data_to_insert: list[dict[str, t.Any]] = [] + copy_statement: str = self.generate_copy_statement(table.name, columns) + self.logger.info("Inserting with SQL: %s", copy_statement) + data_to_copy: list[dict[str, t.Any]] = [] + + # If append only is False, we only take the latest record one per primary key if self.append_only is False: - insert_records: dict[tuple, dict] = {} # pk tuple: record + unique_copy_records: dict[tuple, dict] = {} # pk tuple: values for record in records: insert_record = { - column.name: record.get(column.name) for column in columns + column.name: ( + self.sanitize_null_text_characters(record.get(column.name)) + if self.connector.sanitize_null_text_characters + else record.get(column.name) + ) + for column in columns } # No need to check for a KeyError here because the SDK already # guarantees that all key properties exist in the record. primary_key_tuple = tuple(record[key] for key in primary_keys) - insert_records[primary_key_tuple] = insert_record - data_to_insert = list(insert_records.values()) + unique_copy_records[primary_key_tuple] = insert_record + data_to_copy = list(unique_copy_records.values()) else: for record in records: insert_record = { - column.name: record.get(column.name) for column in columns + column.name: ( + self.sanitize_null_text_characters(record.get(column.name)) + if self.connector.sanitize_null_text_characters + else record.get(column.name) + ) + for column in columns } - data_to_insert.append(insert_record) - connection.execute(insert, data_to_insert) + data_to_copy.append(insert_record) + + # Use each column's bind_processor + column_bind_processors = { + column.name: column.type.bind_processor(connection.dialect) + for column in columns + } + + # Use copy to run the copy statement. + # https://www.psycopg.org/psycopg3/docs/basic/copy.html + with connection.connection.cursor().copy(copy_statement) as copy: # type: ignore[attr-defined] + for row in data_to_copy: + processed_row = [] + for row_column_tuple in row: + if column_bind_processors[row_column_tuple] is not None: + processed_row.append( + column_bind_processors[row_column_tuple]( + row[row_column_tuple] + ) + ) + else: + processed_row.append(row[row_column_tuple]) + + copy.write_row(processed_row) + return True def upsert( diff --git a/target_postgres/target.py b/target_postgres/target.py index 2cc0b714..3d6e249a 100644 --- a/target_postgres/target.py +++ b/target_postgres/target.py @@ -141,23 +141,12 @@ def __init__( th.StringType, description=( "SQLAlchemy connection string. " - + "This will override using host, user, password, port, " - + "dialect, and all ssl settings. Note that you must escape password " + + "This will override using host, user, password, port, and " + + "all ssl settings. Note that you must escape password " + "special characters properly. See " + "https://docs.sqlalchemy.org/en/20/core/engines.html#escaping-special-characters-such-as-signs-in-passwords" ), ), - th.Property( - "dialect+driver", - th.StringType, - default="postgresql+psycopg2", - description=( - "Dialect+driver see " - + "https://docs.sqlalchemy.org/en/20/core/engines.html. " - + "Generally just leave this alone. " - + "Note if sqlalchemy_url is set this will be ignored." - ), - ), th.Property( "default_target_schema", th.StringType, @@ -206,6 +195,17 @@ def __init__( "in an error if the data is not encoded as expected." ), ), + th.Property( + "sanitize_null_text_characters", + th.BooleanType, + default=False, + description=( + "If set to true, the target will sanitize null characters in " + "char/text/varchar fields, as they are not supported by Postgres. " + "See [postgres documentation](https://www.postgresql.org/docs/current/functions-string.html) " # noqa: E501 + "for more information about chr(0) not being supported." + ), + ), th.Property( "ssl_enable", th.BooleanType, diff --git a/target_postgres/tests/core.py b/target_postgres/tests/core.py index c7d79c7a..c48824c6 100644 --- a/target_postgres/tests/core.py +++ b/target_postgres/tests/core.py @@ -8,7 +8,6 @@ def postgres_config(): return { - "dialect+driver": "postgresql+psycopg2", "host": "localhost", "user": "postgres", "password": "postgres", @@ -29,7 +28,6 @@ def postgres_config(): def postgres_config_no_ssl(): return { - "dialect+driver": "postgresql+psycopg2", "host": "localhost", "user": "postgres", "password": "postgres", @@ -43,7 +41,7 @@ def postgres_config_no_ssl(): def postgres_config_ssh_tunnel(): return { - "sqlalchemy_url": "postgresql://postgres:postgres@10.5.0.5:5432/main", + "sqlalchemy_url": "postgresql+psycopg://postgres:postgres@10.5.0.5:5432/main", "ssh_tunnel": { "enable": True, "host": "127.0.0.1", diff --git a/target_postgres/tests/test_sdk.py b/target_postgres/tests/test_sdk.py index 372cca09..07ceb496 100644 --- a/target_postgres/tests/test_sdk.py +++ b/target_postgres/tests/test_sdk.py @@ -10,22 +10,18 @@ TargetCamelcaseTest, TargetCliPrintsTest, TargetDuplicateRecords, - TargetEncodedStringData, TargetInvalidSchemaTest, - TargetMultipleStateMessages, TargetNoPrimaryKeys, TargetOptionalAttributes, TargetRecordBeforeSchemaTest, TargetRecordMissingKeyProperty, TargetRecordMissingOptionalFields, - TargetRecordMissingRequiredProperty, TargetSchemaNoProperties, TargetSchemaUpdates, TargetSpecialCharsInAttributes, ) from target_postgres.target import TargetPostgres - from .core import create_engine, postgres_config target_tests = TestSuite( @@ -62,7 +58,9 @@ class BasePostgresSDKTests: @pytest.fixture() def connection(self, runner): engine = create_engine(runner) - return engine.connect() + with engine.connect() as conn: + yield conn + engine.dispose() SDKTests = get_target_test_class( diff --git a/target_postgres/tests/test_target_postgres.py b/target_postgres/tests/test_target_postgres.py index 7f474005..0d604546 100644 --- a/target_postgres/tests/test_target_postgres.py +++ b/target_postgres/tests/test_target_postgres.py @@ -142,6 +142,7 @@ def verify_data( sqlalchemy.text(f"SELECT COUNT(*) FROM {full_table_name}") ) assert result.first()[0] == number_of_rows + engine.dispose() def test_sqlalchemy_url_config(postgres_config_no_ssl): @@ -157,7 +158,7 @@ def test_sqlalchemy_url_config(postgres_config_no_ssl): port = postgres_config_no_ssl["port"] config = { - "sqlalchemy_url": f"postgresql://{user}:{password}@{host}:{port}/{database}" + "sqlalchemy_url": f"postgresql+psycopg://{user}:{password}@{host}:{port}/{database}" } tap = SampleTapCountries(config={}, state=None) target = TargetPostgres(config=config) @@ -167,13 +168,12 @@ def test_sqlalchemy_url_config(postgres_config_no_ssl): def test_port_default_config(): """Test that the default config is passed into the engine when the config doesn't provide it""" config = { - "dialect+driver": "postgresql+psycopg2", "host": "localhost", "user": "postgres", "password": "postgres", "database": "postgres", } - dialect_driver = config["dialect+driver"] + dialect_driver = "postgresql+psycopg" host = config["host"] user = config["user"] password = config["password"] @@ -186,12 +186,12 @@ def test_port_default_config(): engine.url.render_as_string(hide_password=False) == f"{dialect_driver}://{user}:{password}@{host}:5432/{database}" ) + engine.dispose() def test_port_config(): """Test that the port config works""" config = { - "dialect+driver": "postgresql+psycopg2", "host": "localhost", "user": "postgres", "password": "postgres", @@ -211,6 +211,7 @@ def test_port_config(): engine.url.render_as_string(hide_password=False) == f"{dialect_driver}://{user}:{password}@{host}:5433/{database}" ) + engine.dispose() # Test name would work well @@ -402,6 +403,7 @@ def test_no_primary_keys(postgres_target): singer_file_to_target(file_name, postgres_target) verify_data(postgres_target, table_name, 16) + engine.dispose() def test_no_type(postgres_target): @@ -511,6 +513,7 @@ def test_anyof(postgres_target): # {"anyOf":[{"type":"string"},{"type":"integer"},{"type":"null"}]} if column.name == "legacy_id": assert isinstance(column.type, TEXT) + engine.dispose() def test_new_array_column(postgres_target): @@ -621,6 +624,7 @@ def test_activate_version_hard_delete(postgres_config_no_ssl): assert result.rowcount == 9 singer_file_to_target(file_name, pg_hard_delete_true) + engine.dispose() # Should remove the 2 records we added manually with engine.connect() as connection: @@ -692,6 +696,7 @@ def test_activate_version_soft_delete(postgres_config_no_ssl): # South America row should not have been modified, but it would have been prior # to the fix mentioned in #204 and implemented in #240. assert south_america == result.first()._asdict() + engine.dispose() def test_activate_version_no_metadata(postgres_config_no_ssl): @@ -742,6 +747,7 @@ def test_activate_version_deletes_data_properly(postgres_target): with engine.connect() as connection: result = connection.execute(sqlalchemy.text(f"SELECT * FROM {full_table_name}")) assert result.rowcount == 0 + engine.dispose() def test_reserved_keywords(postgres_target): diff --git a/target_postgres/tests/test_types.py b/target_postgres/tests/test_types.py index 7e58741b..98324b99 100644 --- a/target_postgres/tests/test_types.py +++ b/target_postgres/tests/test_types.py @@ -11,7 +11,6 @@ def connector(): """Create a PostgresConnector instance.""" return PostgresConnector( config={ - "dialect+driver": "postgresql+psycopg2", "host": "localhost", "port": "5432", "user": "postgres",