Recreate the folder tree of a project as it appears on Synapse for selection of folders (instead of a dropdown list of all folders in a project) #303
Labels
critical
an high priority, important item
major
a medium priority item
short-term
Timeline: 2-4 weeks
Is your feature request related to a problem? Please describe.
In many projects, where the data come in batches, the top level folder is appropriately labeled with a unique name but the nested subfolders may have non-unique names. For example :
Top level folder with unique name =
Univ_seqCore_batch1
Nested subfolder with non-unique name =
raw_reads
Top level folder with unique name =
Univ_seqCore_batch2
Nested subfolder with non-unique name =
raw_reads
When using the Data curator app, all the
raw_reads
folders are present in the dropdown menu and indistinguishable from each other unless manually named with unique names.This problem is especially exaggerated if the files come from sequencing cores who have processing pipelines that generate hundreds of nested subfolders with non-unique names. This is also the case for outputs for Sage's own nf-core workflows as well.
Describe the solution you'd like
A non-programmatic user of the Data Curator app would like to view the exact folder tree structure that they see on Synapse, to preserve the context of all the non-uniquely named folders.
How important is this feature? Select from the options below:
I would rate it as
medium to important
since more and more of our data contributors are starting to rely on the Data Curator for annotation.• 🌗 Medium - can do work without it; but it's important (e.g. to save time or for convenience)
• 🌋 Important - it's a blocker and can't do work without it
When will use cases depending on this become relevant? Select from the options below:
• Short-term - 2-4 weeks
We have a few use cases already.
-- Thanks
NF-OSI annotations folks :)
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