v15.0.0

What's Changed

• [GEN-174] allow for patch public release versions to be specified by @thomasyu888 in #481
• [GEN-185] Fusions entrez gene must be integers by @thomasyu888 in #483
• [GEN-33] Support sv format by @thomasyu888 in #480
• [GEN-76] No longer need to include the release version in the release files by @thomasyu888 in #484
• [GEN-258] Update structural variant validation by @thomasyu888 in #487
• [GEN-295] Add extract.py module by @thomasyu888 in #489
• [GEN-323] remove unused classes by @thomasyu888 in #490
• [GEN-324] use conftest throughout tests by @thomasyu888 in #491
• [GEN-299] add load module by @thomasyu888 in #492
• [GEN-416] Pin dependency versions by @thomasyu888 in #498
• [GEN-407] Check GENIE genome nexus instance by @thomasyu888 in #497
• [GEN-424, GEN-423] Allow MT chromosome to be specified by @thomasyu888 in #499

Full Changelog: v14.4.0...v15.0.0

v14.4.0

What's Changed

• [GEN-413] Update GENIE VCF validation by @thomasyu888 in #495
• [GEN-258] Update SV validation by @thomasyu888 in #496

Full Changelog: v14.3.1...v14.4.0

v14.3.1

What's Changed

• [GEN-285] hotfix - make sure release folder fileview is indexed by @thomasyu888 in #488

Full Changelog: v14.3.0...v14.3.1

v14.3.0

What's Changed

• [GEN-174] allow for patch public release versions to be specified by @thomasyu888 in #481
• [GEN-185] Fusions entrez gene must be integers by @thomasyu888 in #483
• [GEN-33] Support sv format by @thomasyu888 in #480
• [GEN-76] No longer need to include the release version in the release files by @thomasyu888 in #484

Full Changelog: v14.2.0...v14.3.0

v14.2.0

What's Changed

• [GEN-45] Add fusion caselist file by @thomasyu888 in #478
• [GEN-95] Make sure to add simple table query to re-index file view by @thomasyu888 in #479
• [GEN-177] HOTFIX - Lock down pandas version by @thomasyu888 in #482

Full Changelog: v14.1.2...v14.2.0

v14.1.2

What's Changed

• Do sample comparison in memory due to limits by @thomasyu888 in #477

Full Changelog: v14.1.1...v14.1.2

v14.1.1

What's Changed

• Make sure to remove # when reading in data by @thomasyu888 in #476

Full Changelog: v14.1.0...v14.1.1

v14.1.0

What's Changed

• Improve maf processing by @thomasyu888 in #475

Full Changelog: v14.0.1...v14.1.0

v14.0.1

What's Changed

• Patch - Upper case the column headers for clinical file by @thomasyu888 in #474

Full Changelog: v14.0.0...v14.0.1

v14.0.0

What's Changed

• assay information was being incorrectly processed by @thomasyu888 in #457
• [IBCSPRT-35] Add clinicalReported column to genomic information file by @thomasyu888 in #459
• [ETL-156, ETL-157, ETL-158] Create configuration dictionary for GENIE code by @thomasyu888 in #455
• Rc 13.2.0 by @thomasyu888 in #462
• allow for unknown interval but known year by @hhunterzinck in #464
• [IBCDPE-178] Create ValidationResult class by @thomasyu888 in #454
• V13.3.0 rc by @thomasyu888 in #468
• [IBCDPE-215] Lint tests by @thomasyu888 in #469
• [ETL-168] Add structural variant class by @thomasyu888 in #452
• [IBCDPE-218] add setupcfg by @thomasyu888 in #470
• [IBCDPE-220] fix lgtm.com code scanning warnings/recommendations by @thomasyu888 in #472
• [IBCDPE-149] Implement new SAMPLE_ID validation by @thomasyu888 in #444

Full Changelog: v13.1.0...v14.0.0