Particle image velocimetry for tracking movement and growth of cells.
Cell_velocity.py :From a folder of .pickles from cellmodeller, returns .csv with velocity (x,y,z and magnitude) of each cell and velocity of the neighborhood (x,y,z and magnitude) for a given Radius run: python path_to_folder_pickles step(ej: 1) stop(ej: 200) Radius
plot_cell_velocity.py: Plots the velocity vector (cell and neighborhood) for each time given.
run: python plot_cell_velocity.py path-output-velocity
plot_magdiff_velocity.py: Plots the magnitude of the difference from the cell-neighbothood velocities for each time.
run: python plot_magdiff_velocity.py path-output-velocity