Merge pull request #445 from RcppCore/feature/armadillo_14.0.0

Armadillo 14.0.0
RcppCore · Jul 4, 2024 · b27b146 · b27b146
2 parents 37461ba + c9d8597
commit b27b146
Show file tree

Hide file tree

Showing 413 changed files with 10,968 additions and 8,498 deletions.
diff --git a/ChangeLog b/ChangeLog
@@ -1,3 +1,10 @@
+2024-06-23  Dirk Eddelbuettel  <[email protected]>
+
+	* DESCRIPTION (Version, Date): RcppArmadillo 0.12.8.4.0.14.4 ie the
+	fourth test package of the 14.0.0 development branch
+
+ 	* inst/include/armadillo_bits/: Armadillo 14.0.0 rc1
+
 2024-05-30  Dirk Eddelbuettel  <[email protected]>
 
 	* DESCRIPTION (Version, Date): RcppArmadillo 0.12.8.4.0

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,8 @@
 Package: RcppArmadillo
 Type: Package
 Title: 'Rcpp' Integration for the 'Armadillo' Templated Linear Algebra Library
-Version: 0.12.8.4.0
-Date: 2024-05-30
+Version: 0.12.8.4.0.14.4
+Date: 2024-06-23
 Author: Dirk Eddelbuettel, Romain Francois, Doug Bates, Binxiang Ni, and Conrad Sanderson
 Maintainer: Dirk Eddelbuettel <[email protected]>
 Description: 'Armadillo' is a templated C++ linear algebra library (by Conrad

diff --git a/inst/include/armadillo b/inst/include/armadillo
@@ -221,6 +221,7 @@ namespace arma
   #include "armadillo_bits/OpCube_bones.hpp"
   #include "armadillo_bits/SpOp_bones.hpp"
   #include "armadillo_bits/SpToDOp_bones.hpp"
+  #include "armadillo_bits/mtSpReduceOp_bones.hpp"
 
   #include "armadillo_bits/eOp_bones.hpp"
   #include "armadillo_bits/eOpCube_bones.hpp"
@@ -314,12 +315,22 @@ namespace arma
   #include "armadillo_bits/op_roots_bones.hpp"
   #include "armadillo_bits/op_cond_bones.hpp"
   #include "armadillo_bits/op_rcond_bones.hpp"
-  #include "armadillo_bits/op_sp_plus_bones.hpp"
-  #include "armadillo_bits/op_sp_minus_bones.hpp"
   #include "armadillo_bits/op_powmat_bones.hpp"
   #include "armadillo_bits/op_rank_bones.hpp"
   #include "armadillo_bits/op_row_as_mat_bones.hpp"
   #include "armadillo_bits/op_col_as_mat_bones.hpp"
+  #include "armadillo_bits/op_sp_plus_bones.hpp"
+  #include "armadillo_bits/op_sp_minus_bones.hpp"
+  #include "armadillo_bits/op_sp_sum_bones.hpp"
+  #include "armadillo_bits/op_sp_max_bones.hpp"
+  #include "armadillo_bits/op_sp_min_bones.hpp"
+  #include "armadillo_bits/op_sp_mean_bones.hpp"
+  #include "armadillo_bits/op_sp_var_bones.hpp"
+  #include "armadillo_bits/op_sp_stddev_bones.hpp"
+  #include "armadillo_bits/op_sp_vecnorm_bones.hpp"
+  #include "armadillo_bits/op_sp_diagvec_bones.hpp"
+  #include "armadillo_bits/op_sp_nonzeros_bones.hpp"
+  #include "armadillo_bits/op_sp_as_dense_bones.hpp"
 
   #include "armadillo_bits/glue_times_bones.hpp"
   #include "armadillo_bits/glue_times_misc_bones.hpp"
@@ -352,24 +363,19 @@ namespace arma
   #include "armadillo_bits/gmm_diag_bones.hpp"
   #include "armadillo_bits/gmm_full_bones.hpp"
 
-  #include "armadillo_bits/spop_max_bones.hpp"
-  #include "armadillo_bits/spop_min_bones.hpp"
-  #include "armadillo_bits/spop_sum_bones.hpp"
   #include "armadillo_bits/spop_strans_bones.hpp"
   #include "armadillo_bits/spop_htrans_bones.hpp"
   #include "armadillo_bits/spop_misc_bones.hpp"
   #include "armadillo_bits/spop_diagmat_bones.hpp"
-  #include "armadillo_bits/spop_mean_bones.hpp"
-  #include "armadillo_bits/spop_var_bones.hpp"
   #include "armadillo_bits/spop_trimat_bones.hpp"
   #include "armadillo_bits/spop_symmat_bones.hpp"
   #include "armadillo_bits/spop_normalise_bones.hpp"
   #include "armadillo_bits/spop_reverse_bones.hpp"
   #include "armadillo_bits/spop_repmat_bones.hpp"
   #include "armadillo_bits/spop_vectorise_bones.hpp"
   #include "armadillo_bits/spop_norm_bones.hpp"
-  #include "armadillo_bits/spop_vecnorm_bones.hpp"
   #include "armadillo_bits/spop_shift_bones.hpp"
+  #include "armadillo_bits/spop_relational_bones.hpp"
 
   #include "armadillo_bits/spglue_plus_bones.hpp"
   #include "armadillo_bits/spglue_minus_bones.hpp"
@@ -624,6 +630,7 @@ namespace arma
   #include "armadillo_bits/mtOp_meat.hpp"
   #include "armadillo_bits/mtOpCube_meat.hpp"
   #include "armadillo_bits/mtSpOp_meat.hpp"
+  #include "armadillo_bits/mtSpReduceOp_meat.hpp"
 
   #include "armadillo_bits/Glue_meat.hpp"
   #include "armadillo_bits/GlueCube_meat.hpp"
@@ -762,12 +769,22 @@ namespace arma
   #include "armadillo_bits/op_roots_meat.hpp"
   #include "armadillo_bits/op_cond_meat.hpp"
   #include "armadillo_bits/op_rcond_meat.hpp"
-  #include "armadillo_bits/op_sp_plus_meat.hpp"
-  #include "armadillo_bits/op_sp_minus_meat.hpp"
   #include "armadillo_bits/op_powmat_meat.hpp"
   #include "armadillo_bits/op_rank_meat.hpp"
   #include "armadillo_bits/op_row_as_mat_meat.hpp"
   #include "armadillo_bits/op_col_as_mat_meat.hpp"
+  #include "armadillo_bits/op_sp_plus_meat.hpp"
+  #include "armadillo_bits/op_sp_minus_meat.hpp"
+  #include "armadillo_bits/op_sp_sum_meat.hpp"
+  #include "armadillo_bits/op_sp_max_meat.hpp"
+  #include "armadillo_bits/op_sp_min_meat.hpp"
+  #include "armadillo_bits/op_sp_mean_meat.hpp"
+  #include "armadillo_bits/op_sp_var_meat.hpp"
+  #include "armadillo_bits/op_sp_stddev_meat.hpp"
+  #include "armadillo_bits/op_sp_vecnorm_meat.hpp"
+  #include "armadillo_bits/op_sp_diagvec_meat.hpp"
+  #include "armadillo_bits/op_sp_nonzeros_meat.hpp"
+  #include "armadillo_bits/op_sp_as_dense_meat.hpp"
 
   #include "armadillo_bits/glue_times_meat.hpp"
   #include "armadillo_bits/glue_times_misc_meat.hpp"
@@ -800,24 +817,19 @@ namespace arma
   #include "armadillo_bits/gmm_diag_meat.hpp"
   #include "armadillo_bits/gmm_full_meat.hpp"
 
-  #include "armadillo_bits/spop_max_meat.hpp"
-  #include "armadillo_bits/spop_min_meat.hpp"
-  #include "armadillo_bits/spop_sum_meat.hpp"
   #include "armadillo_bits/spop_strans_meat.hpp"
   #include "armadillo_bits/spop_htrans_meat.hpp"
   #include "armadillo_bits/spop_misc_meat.hpp"
   #include "armadillo_bits/spop_diagmat_meat.hpp"
-  #include "armadillo_bits/spop_mean_meat.hpp"
-  #include "armadillo_bits/spop_var_meat.hpp"
   #include "armadillo_bits/spop_trimat_meat.hpp"
   #include "armadillo_bits/spop_symmat_meat.hpp"
   #include "armadillo_bits/spop_normalise_meat.hpp"
   #include "armadillo_bits/spop_reverse_meat.hpp"
   #include "armadillo_bits/spop_repmat_meat.hpp"
   #include "armadillo_bits/spop_vectorise_meat.hpp"
   #include "armadillo_bits/spop_norm_meat.hpp"
-  #include "armadillo_bits/spop_vecnorm_meat.hpp"
   #include "armadillo_bits/spop_shift_meat.hpp"
+  #include "armadillo_bits/spop_relational_meat.hpp"
 
   #include "armadillo_bits/spglue_plus_meat.hpp"
   #include "armadillo_bits/spglue_minus_meat.hpp"

diff --git a/inst/include/armadillo_bits/BaseCube_meat.hpp b/inst/include/armadillo_bits/BaseCube_meat.hpp
@@ -36,7 +36,7 @@ inline
 void
 BaseCube<elem_type,derived>::print(const std::string extra_text) const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   const unwrap_cube<derived> tmp( (*this).get_ref() );
 
@@ -59,7 +59,7 @@ inline
 void
 BaseCube<elem_type,derived>::print(std::ostream& user_stream, const std::string extra_text) const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   const unwrap_cube<derived> tmp( (*this).get_ref() );
 
@@ -82,7 +82,7 @@ inline
 void
 BaseCube<elem_type,derived>::raw_print(const std::string extra_text) const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   const unwrap_cube<derived> tmp( (*this).get_ref() );
 
@@ -105,7 +105,7 @@ inline
 void
 BaseCube<elem_type,derived>::raw_print(std::ostream& user_stream, const std::string extra_text) const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   const unwrap_cube<derived> tmp( (*this).get_ref() );
 
@@ -128,7 +128,7 @@ inline
 void
 BaseCube<elem_type,derived>::brief_print(const std::string extra_text) const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   const unwrap_cube<derived> tmp( (*this).get_ref() );
 
@@ -151,7 +151,7 @@ inline
 void
 BaseCube<elem_type,derived>::brief_print(std::ostream& user_stream, const std::string extra_text) const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   const unwrap_cube<derived> tmp( (*this).get_ref() );
 
@@ -200,7 +200,7 @@ BaseCube<elem_type,derived>::index_min() const
 
   if(P.get_n_elem() == 0)
     {
-    arma_debug_check(true, "index_min(): object has no elements");
+    arma_conform_check(true, "index_min(): object has no elements");
     }
   else
     {
@@ -223,7 +223,7 @@ BaseCube<elem_type,derived>::index_max() const
 
   if(P.get_n_elem() == 0)
     {
-    arma_debug_check(true, "index_max(): object has no elements");
+    arma_conform_check(true, "index_max(): object has no elements");
     }
   else
     {
@@ -240,11 +240,11 @@ inline
 bool
 BaseCube<elem_type,derived>::is_zero(const typename get_pod_type<elem_type>::result tol) const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   typedef typename get_pod_type<elem_type>::result T;
 
-  arma_debug_check( (tol < T(0)), "is_zero(): parameter 'tol' must be >= 0" );
+  arma_conform_check( (tol < T(0)), "is_zero(): parameter 'tol' must be >= 0" );
 
   if(ProxyCube<derived>::use_at || is_Cube<typename ProxyCube<derived>::stored_type>::value)
     {
@@ -292,7 +292,7 @@ inline
 bool
 BaseCube<elem_type,derived>::is_empty() const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   const ProxyCube<derived> P( (*this).get_ref() );
 
@@ -306,9 +306,9 @@ inline
 bool
 BaseCube<elem_type,derived>::is_finite() const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
-  if(arma_config::fast_math_warn)  { arma_debug_warn_level(1, "is_finite(): detection of non-finite values is not reliable in fast math mode"); }
+  if(arma_config::fast_math_warn)  { arma_warn(1, "is_finite(): detection of non-finite values is not reliable in fast math mode"); }
 
   if(is_Cube<typename ProxyCube<derived>::stored_type>::value)
     {
@@ -342,9 +342,9 @@ inline
 bool
 BaseCube<elem_type,derived>::has_inf() const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
-  if(arma_config::fast_math_warn)  { arma_debug_warn_level(1, "has_inf(): detection of non-finite values is not reliable in fast math mode"); }
+  if(arma_config::fast_math_warn)  { arma_warn(1, "has_inf(): detection of non-finite values is not reliable in fast math mode"); }
 
   if(is_Cube<typename ProxyCube<derived>::stored_type>::value)
     {
@@ -378,9 +378,9 @@ inline
 bool
 BaseCube<elem_type,derived>::has_nan() const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
-  if(arma_config::fast_math_warn)  { arma_debug_warn_level(1, "has_nan(): detection of non-finite values is not reliable in fast math mode"); }
+  if(arma_config::fast_math_warn)  { arma_warn(1, "has_nan(): detection of non-finite values is not reliable in fast math mode"); }
 
   if(is_Cube<typename ProxyCube<derived>::stored_type>::value)
     {
@@ -414,9 +414,9 @@ inline
 bool
 BaseCube<elem_type,derived>::has_nonfinite() const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
-  if(arma_config::fast_math_warn)  { arma_debug_warn_level(1, "has_nonfinite(): detection of non-finite values is not reliable in fast math mode"); }
+  if(arma_config::fast_math_warn)  { arma_warn(1, "has_nonfinite(): detection of non-finite values is not reliable in fast math mode"); }
 
   if(is_Cube<typename ProxyCube<derived>::stored_type>::value)
     {
@@ -473,7 +473,7 @@ arma_inline
 const derived&
 BaseCube_eval_Cube<elem_type, derived>::eval() const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   return static_cast<const derived&>(*this);
   }
@@ -488,7 +488,7 @@ inline
 Cube<elem_type>
 BaseCube_eval_expr<elem_type, derived>::eval() const
   {
-  arma_extra_debug_sigprint();
+  arma_debug_sigprint();
 
   return Cube<elem_type>( static_cast<const derived&>(*this) );
   }