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README

This is a small app to apply MIC testing results to the 2015 CLSI breakpoints.

  • TestReactions model is used for testing and to show proof of concept.

  • test/fixtures contains real data for production DB and can be load with $ rake db:fixtures:import

  • import csv via rake csv:import MODEL=Organism FILENAME=csv/test_data.organisms.csv

  • Dump Fixtures: rake db:fixtures:dump FIXTURES_PATH=test/fixtures/

  • default user in fixture is: [email protected] / password123

  • added console_helper.rb for debugging breakpoint search in rails console load ‘./console_helper.rb’

  • run “ruby testforever.rb” while viewing log in seperate window with “tail -f log/test.log”

Current Issues

  • calc_breakpoint is sometimes failing with nil result. Working on following each condition until all errors are resolved and only failing tests are left.

  • Need to add edge to S I R calculation after errors are resolved

Work in Progress:

  • Final Results

  • Setup asset pipeline for Dokku