From 1e765f89c43aa4bf395e55092309977b2509739b Mon Sep 17 00:00:00 2001
From: Helge Hecht <helge.hecht@recetox.muni.cz>
Date: Fri, 1 Dec 2023 10:41:26 +0000
Subject: [PATCH] try more threads

---
 tools/matchms/matchms_formatter.xml      | 4 ++--
 tools/matchms/matchms_metadata_merge.xml | 4 ++--
 tools/matchms/matchms_subsetting.xml     | 4 ++--
 tools/rem_complex/rem_complex.xml        | 4 ++--
 4 files changed, 8 insertions(+), 8 deletions(-)

diff --git a/tools/matchms/matchms_formatter.xml b/tools/matchms/matchms_formatter.xml
index efd56f018..35549230b 100644
--- a/tools/matchms/matchms_formatter.xml
+++ b/tools/matchms/matchms_formatter.xml
@@ -1,4 +1,4 @@
-<tool id="matchms_formatter" name="matchms scores formatter" version="@TOOL_VERSION@+galaxy1" profile="21.09">
+<tool id="matchms_formatter" name="matchms scores formatter" version="@TOOL_VERSION@+galaxy2" profile="21.09">
     <description>reformat scores object of matchms to long format table</description>
 
     <macros>
@@ -24,7 +24,7 @@
     <environment_variables>
         <environment_variable name="MPLCONFIGDIR">\$_GALAXY_JOB_TMP_DIR</environment_variable>
         <environment_variable name="XDG_CACHE_HOME">\$_GALAXY_JOB_TMP_DIR</environment_variable>
-        <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable>
+        <environment_variable name="OPENBLAS_NUM_THREADS">4</environment_variable>
     </environment_variables>
 
     <configfiles>
diff --git a/tools/matchms/matchms_metadata_merge.xml b/tools/matchms/matchms_metadata_merge.xml
index 8c68f41e5..1cd00550c 100644
--- a/tools/matchms/matchms_metadata_merge.xml
+++ b/tools/matchms/matchms_metadata_merge.xml
@@ -1,4 +1,4 @@
-<tool id="matchms_metadata_merge" name="matchms metadata merge" version="@TOOL_VERSION@+galaxy2" profile="21.09">
+<tool id="matchms_metadata_merge" name="matchms metadata merge" version="@TOOL_VERSION@+galaxy3" profile="21.09">
     <description>Merge metadata csv into MSP by a specified column</description>
     
     <macros>
@@ -22,7 +22,7 @@
     ]]></command>
 
     <environment_variables>
-        <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable>
+        <environment_variable name="OPENBLAS_NUM_THREADS">4</environment_variable>
     </environment_variables>
 
 <configfiles>
diff --git a/tools/matchms/matchms_subsetting.xml b/tools/matchms/matchms_subsetting.xml
index 6a0622deb..3e46fac12 100644
--- a/tools/matchms/matchms_subsetting.xml
+++ b/tools/matchms/matchms_subsetting.xml
@@ -1,4 +1,4 @@
-<tool id="matchms_subsetting" name="matchms subsetting" version="@TOOL_VERSION@+galaxy2" profile="21.09">
+<tool id="matchms_subsetting" name="matchms subsetting" version="@TOOL_VERSION@+galaxy3" profile="21.09">
     <description>Extract spectra from a library given unique metadata identifier</description>
     
     <macros>
@@ -22,7 +22,7 @@
     ]]></command>
 
     <environment_variables>
-        <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable>
+        <environment_variable name="OPENBLAS_NUM_THREADS">4</environment_variable>
     </environment_variables>
 
 <configfiles>
diff --git a/tools/rem_complex/rem_complex.xml b/tools/rem_complex/rem_complex.xml
index 8e5d43054..bd164cfde 100644
--- a/tools/rem_complex/rem_complex.xml
+++ b/tools/rem_complex/rem_complex.xml
@@ -1,4 +1,4 @@
-<tool id="rem_complex" name="Remove coordination complexes" version="@TOOL_VERSION@+galaxy1"  profile="21.09">
+<tool id="rem_complex" name="Remove coordination complexes" version="@TOOL_VERSION@+galaxy2"  profile="21.09">
     <description>Remove molecular coordination complexes from a list of structure representations</description>
     <macros>
         <import>macros.xml</import>
@@ -16,7 +16,7 @@
     ]]></command>
 
     <environment_variables>
-        <environment_variable name="OPENBLAS_NUM_THREADS">1</environment_variable>
+        <environment_variable name="OPENBLAS_NUM_THREADS">4</environment_variable>
     </environment_variables>
     
     <inputs>