From 6ee12278967474bc3e54c4255d7d81679f4de165 Mon Sep 17 00:00:00 2001 From: SwiftySalmon Date: Mon, 15 Jul 2024 10:52:55 +0000 Subject: [PATCH] Style code --- .../filter_nsu_duplicates.R | 23 +++++++++++-------- 1 file changed, 13 insertions(+), 10 deletions(-) diff --git a/extract_new_nsu_cohort/filter_nsu_duplicates.R b/extract_new_nsu_cohort/filter_nsu_duplicates.R index 3fa7ea3a2..88caa169c 100644 --- a/extract_new_nsu_cohort/filter_nsu_duplicates.R +++ b/extract_new_nsu_cohort/filter_nsu_duplicates.R @@ -50,13 +50,15 @@ schema <- "FINAL_2" nsu_dir <- path("/conf/hscdiip/SLF_Extracts/NSU") # latest geography file - spd_path <- get_file_path( - directory = fs::path(fs::path("/", "conf", "linkage", "output", "lookups", "Unicode"), - "Geography", - "Scottish Postcode Directory"), - file_name = NULL, - file_name_regexp = stringr::str_glue("Scottish_Postcode_Directory_.+?\\.parquet") - ) +spd_path <- get_file_path( + directory = fs::path( + fs::path("/", "conf", "linkage", "output", "lookups", "Unicode"), + "Geography", + "Scottish Postcode Directory" + ), + file_name = NULL, + file_name_regexp = stringr::str_glue("Scottish_Postcode_Directory_.+?\\.parquet") +) # Set up connection to SMRA----------------------------------------------------- db_connection <- odbc::dbConnect( @@ -86,7 +88,7 @@ nsu_pc_duplicates <- nsu_data %>% filter(postcode_count > 1) # Get the latest SPD -spd <- read_file(spd_path) %>% +spd <- read_file(spd_path) %>% select(pc7, date_of_introduction, date_of_deletion) # Load some regex to check if a postcode is valid @@ -169,7 +171,7 @@ final_data <- nsu_data %>% # Filter the main dataset to remove # the duplicate postcodes we decided not to keep anti_join(nsu_pc_duplicates_checked %>% - filter(keep_priority > 1)) %>% + filter(keep_priority > 1)) %>% # Filter any remaining duplicates (none on this test) distinct(upi_number, .keep_all = TRUE) %>% select( @@ -191,7 +193,8 @@ final_data <- nsu_data %>% # Save data out to be used final_data %>% arrow::write_parquet(path(nsu_dir, glue::glue("anon-All_CHIs_20{year}.parquet")), - compression = "zstd") + compression = "zstd" + ) ## End of Script ##