Simple example of adapting non-MONAI Pytorch code to bundles #1452
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ericspod
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Sep 19, 2023
Fixes #1457, #1452. ### Description This adds tutorials going through the process of creating bundles in their entirety. Notebooks to add: - [x] Very simple intro to bundles and the file structure - [x] Simple network bundle that actually does something with training - [x] Bundle wrapping pre-existing code and network definitions which would cover non-MONAI code - [ ] Bundle wrapping non-Pytorch code, maybe? ### Checks <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [x] Avoid including large-size files in the PR. - [x] Clean up long text outputs from code cells in the notebook. - [x] For security purposes, please check the contents and remove any sensitive info such as user names and private key. - [x] Ensure (1) hyperlinks and markdown anchors are working (2) use relative paths for tutorial repo files (3) put figure and graphs in the `./figure` folder - [ ] Notebook runs automatically `./runner.sh -t <path to .ipynb file>` --------- Signed-off-by: Eric Kerfoot <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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This is addressed by the 4th notebook in #1493 |
boneseva
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Apr 21, 2024
Fixes Project-MONAI#1457, Project-MONAI#1452. ### Description This adds tutorials going through the process of creating bundles in their entirety. Notebooks to add: - [x] Very simple intro to bundles and the file structure - [x] Simple network bundle that actually does something with training - [x] Bundle wrapping pre-existing code and network definitions which would cover non-MONAI code - [ ] Bundle wrapping non-Pytorch code, maybe? ### Checks <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [x] Avoid including large-size files in the PR. - [x] Clean up long text outputs from code cells in the notebook. - [x] For security purposes, please check the contents and remove any sensitive info such as user names and private key. - [x] Ensure (1) hyperlinks and markdown anchors are working (2) use relative paths for tutorial repo files (3) put figure and graphs in the `./figure` folder - [ ] Notebook runs automatically `./runner.sh -t <path to .ipynb file>` --------- Signed-off-by: Eric Kerfoot <[email protected]> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
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