From 682bc2ac956af8fa963b4f08a2aca4257140e9c2 Mon Sep 17 00:00:00 2001
From: Taylor Salo <tsalo006@fiu.edu>
Date: Wed, 13 Dec 2023 12:14:17 -0500
Subject: [PATCH] Add applywarp from FSL.

---
 Dockerfile | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/Dockerfile b/Dockerfile
index f2f0174..b5bfdb9 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -140,6 +140,9 @@ COPY --from=build_fsl /usr/lib/fsl/5.0/libfslio.so /opt/fsl/lib/libfslio.so
 COPY --from=build_fsl /usr/lib/fsl/5.0/libutils.so /opt/fsl/lib/libutils.so
 COPY --from=build_fsl /usr/lib/fsl/5.0/libprob.so /opt/fsl/lib/libprob.so
 COPY --from=build_fsl /usr/lib/libnewmat.so.10.0.0 /opt/fsl/lib/libnewmat.so.10
+# Install applywarp from FSL for UK Biobank data
+COPY --from=build_fsl /usr/lib/fsl/5.0/applywarp /opt/fsl/lib/applywarp
+
 ENV FSLDIR="/opt/fsl" \
     FSLOUTPUTTYPE="NIFTI_GZ" \
     FSLMULTIFILEQUIT="TRUE" \