Test data

[tsalo]

I'm going to create two sets of test data, both from MyConnectome. I identified the 17 sessions that have both T1w and T2w scans, and will process them longitudinally and in a session-wise basis.

Version 1: Longitudinal processing

1. Create a BIDS filter file with "t1w" and "t2w" entries. In both entries, set the session field to the list of 17 sessions.
2. Submit an sMRIPrep job with the BIDS filter file.

Version 2: Session-wise processing

1. Create a separate BIDS filter file for each session. In each session-wise file, set "t1w": {"session": [ses]} and "t2w": {"session": [ses]} with ses as the session.
2. Submit a separate job with a different working directory and output directory for each session.
3. Run sMRIPrep.
4. Combine the sMRIPrep and Freesurfer derivatives.