diff --git a/.circleci/MultiT1w.sh b/.circleci/MultiT1w.sh index c5667dca..184e4e43 100644 --- a/.circleci/MultiT1w.sh +++ b/.circleci/MultiT1w.sh @@ -38,7 +38,6 @@ rm -rf data/DSDTI/sub-PNC/fmap # Create a shifted version of the t1w if [[ "${IN_CI}" = 'true' ]]; then 3dWarp \ - ${IMAGE} \ -matvec_in2out 'MATRIX(1,0,0,2,0,1,0,4,0,0,1,1)' \ -gridset ${BIDS_INPUT_DIR}/sub-PNC/anat/sub-PNC_T1w.nii.gz \ -prefix ${BIDS_INPUT_DIR}/sub-PNC/anat/sub-PNC_run-02_T1w.nii.gz \ diff --git a/.circleci/config.yml b/.circleci/config.yml index df6f3e17..7eac36ca 100644 --- a/.circleci/config.yml +++ b/.circleci/config.yml @@ -2,7 +2,7 @@ version: 2.1 .dockersetup: &dockersetup docker: - - image: pennbbl/qsiprep_build:24.1.0 + - image: pennbbl/qsiprep_build:24.1.4 working_directory: /src/qsiprep runinstall: &runinstall diff --git a/Dockerfile b/Dockerfile index db705b0a..c9fa6981 100644 --- a/Dockerfile +++ b/Dockerfile @@ -7,7 +7,7 @@ RUN apt-get update && \ COPY . /src/qsiprep RUN python -m build /src/qsiprep -FROM pennbbl/qsiprep_build:24.1.0 +FROM pennbbl/qsiprep_build:24.1.4 # Install qsiprep wheel COPY --from=wheelstage /src/qsiprep/dist/*.whl .