From 0f678dbe33b7516b87512d9ff2fd5f1ed843cedc Mon Sep 17 00:00:00 2001
From: Taylor Salo <tsalo006@fiu.edu>
Date: Tue, 9 Jul 2024 13:44:20 -0400
Subject: [PATCH] Add logged messages.

---
 qsiprep/viz/reports.py | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/qsiprep/viz/reports.py b/qsiprep/viz/reports.py
index d936a408..8a88461e 100644
--- a/qsiprep/viz/reports.py
+++ b/qsiprep/viz/reports.py
@@ -358,6 +358,7 @@ def generate_reports(subject_list, pipeline_mode="qsiprep"):
     """
     A wrapper to run_reports on a given ``subject_list``
     """
+    config.loggers.cli.warning(f"Generating report for pipeline mode '{pipeline_mode}")
     reports_dir = str(config.execution.reportlets_dir)
     run_uuid = config.execution.run_uuid
     if config.execution.recon_only:
@@ -368,6 +369,8 @@ def generate_reports(subject_list, pipeline_mode="qsiprep"):
         else:
             output_dir = str(config.execution.qsiprep_dir / pipeline_mode)
 
+    config.loggers.cli.warning(f"Using report output dir '{output_dir}")
+
     report_errors = [
         run_reports(
             reports_dir,