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CIFTI outputs from #338 aren't being generated correctly. Unfortunately, the easiest way for me to debug this is to merge the PR, build the Singularity image on CUBIC, and test there.
Stderr:
While running:
wb_command -volume-to-surface-mapping /src/aslprep/.circleci/work/test_003_full/aslprep_0_6_wf/sub_01_wf/asl_preproc_ses_1_wf/ds_asl_cifti_wf/warp_mean_cbf_to_anat/sub-01_ses-1_asl_DeltaMOrCBF_meancbf_trans.nii.gz /src/aslprep/.circleci/data/anatomical/smriprep/sub-01/anat/sub-01_hemi-L_midthickness.surf.gii sub-01_hemi-L_midthickness.surf_mapped.func.gii -ribbon-constrained /src/aslprep/.circleci/data/anatomical/smriprep/sub-01/anat/sub-01_hemi-L_white.surf.gii /src/aslprep/.circleci/data/anatomical/smriprep/sub-01/anat/sub-01_hemi-L_pial.surf.gii -volume-roi /src/aslprep/.circleci/work/test_003_full/aslprep_0_6_wf/sub_01_wf/asl_preproc_ses_1_wf/asl_cifti_resample_wf/goodvoxels_bold_mask_wf/goodvoxels_mask/sub-01_ses-1_asl_reduced_std_maths_maths_maths_thresh_maths.nii.gz
ERROR: roi volume is not in the same volume space as input volume
The text was updated successfully, but these errors were encountered:
Summary
CIFTI outputs from #338 aren't being generated correctly. Unfortunately, the easiest way for me to debug this is to merge the PR, build the Singularity image on CUBIC, and test there.
Additional details
What were you trying to do?
Include
--cifti-output
in the ASLPrep call.What did you expect to happen?
Get CIFTI outputs.
What actually happened?
The text was updated successfully, but these errors were encountered: