From 4d078f0216434988f159367fd7fbe1626d43d4af Mon Sep 17 00:00:00 2001
From: Sidi <sidiy@merck.com>
Date: Wed, 11 Dec 2024 17:09:41 -0500
Subject: [PATCH] update renv for gsDesign/gsDesign2 and the comparison code
 for latest rpact

---
 Comp/r-east_gsd_tte.qmd | 5 +++--
 renv.lock               | 4 ++--
 2 files changed, 5 insertions(+), 4 deletions(-)

diff --git a/Comp/r-east_gsd_tte.qmd b/Comp/r-east_gsd_tte.qmd
index 4cea64b5..8a6057e9 100644
--- a/Comp/r-east_gsd_tte.qmd
+++ b/Comp/r-east_gsd_tte.qmd
@@ -410,7 +410,9 @@ pval_fut <- pfs_rpact$futilityBoundsPValueScale
 zval_eff <- pfs_rpact_gsd$criticalValues
 zval_fut <- pfs_rpact_gsd$futilityBounds
 pcross_h0_eff <- pfs_rpact_gsd$alphaSpent
-pcross_h0_fut <- as.numeric(summary(pfs_rpact)$summaryItems[[20]]$values[[1]])
+pcross_h0_fut <- summary(pfs_rpact)$summaryItems |> 
+  purrr::keep(~.x$title == "Exit probability for futility (under H0)") |>
+  purrr::map_dbl(~as.numeric(.x$values))
 
 ia1_eff <- c(zval_eff[1], pval_eff[1], hr_bound_eff[1], pcross_h0_eff[1], pcross_h1_eff[1])
 fa_eff <-  c(zval_eff[2], pval_eff[2], hr_bound_eff[2], pcross_h0_eff[2], pcross_h1_eff[2])
@@ -461,7 +463,6 @@ pfs_rpact_sum |>
 
 ```
 
-
 ```{r}
 sessionInfo()
 ```
diff --git a/renv.lock b/renv.lock
index 7d0fc170..2b67fef7 100644
--- a/renv.lock
+++ b/renv.lock
@@ -1895,7 +1895,7 @@
     },
     "gsDesign": {
       "Package": "gsDesign",
-      "Version": "3.6.4",
+      "Version": "3.6.5",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [
@@ -1918,7 +1918,7 @@
     },
     "gsDesign2": {
       "Package": "gsDesign2",
-      "Version": "1.1.2",
+      "Version": "1.1.3",
       "Source": "Repository",
       "Repository": "CRAN",
       "Requirements": [