diff --git a/CreateMSGFPlusResultsFileFromPHRP/Program.cs b/CreateMSGFPlusResultsFileFromPHRP/Program.cs
index 58485df..4467555 100644
--- a/CreateMSGFPlusResultsFileFromPHRP/Program.cs
+++ b/CreateMSGFPlusResultsFileFromPHRP/Program.cs
@@ -378,7 +378,7 @@ private static void ShowProgramHelp()
Console.WriteLine("E-mail: matthew.monroe@pnnl.gov or proteomics@pnnl.gov");
Console.WriteLine("Website: https://github.com/PNNL-Comp-Mass-Spec/ or https://panomics.pnnl.gov/ or https://www.pnnl.gov/integrative-omics");
- // Delay for 750 msec in case the user double clicked this file from within Windows Explorer (or started the program via a shortcut)
+ // Delay for 750 msec in case the user double-clicked this file from within Windows Explorer (or started the program via a shortcut)
Thread.Sleep(750);
}
catch (Exception ex)
diff --git a/PeptideHitResultsProcessor/SearchToolResults/ToolResultsBaseClass.cs b/PeptideHitResultsProcessor/SearchToolResults/ToolResultsBaseClass.cs
index 20a5169..141eada 100644
--- a/PeptideHitResultsProcessor/SearchToolResults/ToolResultsBaseClass.cs
+++ b/PeptideHitResultsProcessor/SearchToolResults/ToolResultsBaseClass.cs
@@ -312,6 +312,11 @@ public abstract class ToolResultsBaseClass
///
/// From column Q.Value for DIA-NN
///
+ ///
+ /// The MSGF Results Summarizer filters on QValue when computing PSM stats, which are stored in the database using procedure store_job_psm_stats
+ /// Stats are displayed on the Analysis Job Detail Report page, for example:
+ /// Spectra Searched: 23949, Total PSMs: 12317, Unique Peptides: 10439, Unique Proteins: 2247 (FDR < 1.00%)
+ ///
///
public double QValue;
}
diff --git a/Program.cs b/Program.cs
index 74d6238..9748827 100644
--- a/Program.cs
+++ b/Program.cs
@@ -91,7 +91,7 @@ public static int Main(string[] args)
return 0;
}
- // Delay for 750 msec in case the user double clicked this file from within Windows Explorer (or started the program via a shortcut)
+ // Delay for 750 msec in case the user double-clicked this file from within Windows Explorer (or started the program via a shortcut)
Thread.Sleep(750);
return -1;