From 88047954619d89d886fe488677df60f25931fe7b Mon Sep 17 00:00:00 2001
From: Luke Zappia <lazappi@users.noreply.github.com>
Date: Thu, 17 Oct 2024 12:37:59 +0200
Subject: [PATCH] Use all test coverage and fix pkgdown deployment

---
 .github/workflows/check.yml | 12 ++++++++++++
 1 file changed, 12 insertions(+)

diff --git a/.github/workflows/check.yml b/.github/workflows/check.yml
index ce1fecd..03b8ef2 100644
--- a/.github/workflows/check.yml
+++ b/.github/workflows/check.yml
@@ -260,6 +260,7 @@ jobs:
           cov <- covr::package_coverage(
             quiet = FALSE,
             clean = FALSE,
+            type  = "all",
             install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
           )
           covr::to_cobertura(cov)
@@ -311,9 +312,20 @@ jobs:
       - name: Checkout
         uses: actions/checkout@v4
 
+      - name: Set git credentials
+        ## Assign commits to the GitHub Action user. This should happen
+        ## automatically but doesn't (maybe because of Docker).
+      - run: |
+          git config user.name github-actions[bot]
+          git config user.email github-actions[bot]@users.noreply.github.com
+
       - name: Install extra linux dependencies
         run: sudo apt-get update -y && sudo apt-get install -y libcurl4-openssl-dev devscripts qpdf
 
+      - name: Install rsync 📚
+        run: |
+          apt-get update && apt-get install -y rsync
+
       - name: Setup R dependencies
         uses: r-lib/actions/setup-r-dependencies@v2
         with: