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Releases: OpenGene/fastp

Support polyG tail trimming

05 Dec 06:46
1f42298
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For Illumina NextSeq/NovaSeq data, polyG can happen in read tails since G means no signal in the Illumina two-color systems. fastp can detect the polyG in read tails and trim them. This feature is enabled for NextSeq/NovaSeq data by default, and you can specify -g or --trim_poly_g to enable it for any data, or specify -G or --disable_trim_poly_g to disable it. NextSeq/NovaSeq data is detected by the machine ID in the FASTQ records.

Revision with number formatting and read number evaluation

30 Nov 03:07
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Support UMI processing

29 Nov 03:31
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v0.9.0

support per_index / per_read for UMI processing

Support splitting by lines

27 Nov 07:18
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v0.8.0

fix a typo of split

Support base correction by overlap analysis

26 Nov 06:23
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v0.7.0

set version to v0.7.0

Small bug fix for FASTQ format handling

22 Nov 00:41
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v0.6.1

set version to v0.6.1

Support long reads (PacBio / Nanopore)

20 Nov 01:46
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v0.6.0

set version to v0.6.0

Detect adapter sequence automatically for SE data

10 Nov 15:36
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v0.5.0

fix memory header file issue for Linux

Support adapter trimming for single end data

09 Nov 02:26
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use -s <adapter_sequence> to enable trimming for single end data

Support sliding window cutting by quality

08 Nov 12:37
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v0.3.0

set version to v0.3.0