Releases: OpenGene/fastp
Releases · OpenGene/fastp
Support polyG tail trimming
For Illumina NextSeq/NovaSeq data, polyG can happen in read tails since G means no signal in the Illumina two-color systems. fastp can detect the polyG in read tails and trim them. This feature is enabled for NextSeq/NovaSeq data by default, and you can specify -g or --trim_poly_g to enable it for any data, or specify -G or --disable_trim_poly_g to disable it. NextSeq/NovaSeq data is detected by the machine ID in the FASTQ records.
Revision with number formatting and read number evaluation
v0.9.1 set version to v0.9.1
Support UMI processing
v0.9.0 support per_index / per_read for UMI processing
Support splitting by lines
v0.8.0 fix a typo of split
Support base correction by overlap analysis
v0.7.0 set version to v0.7.0
Small bug fix for FASTQ format handling
v0.6.1 set version to v0.6.1
Support long reads (PacBio / Nanopore)
v0.6.0 set version to v0.6.0
Detect adapter sequence automatically for SE data
v0.5.0 fix memory header file issue for Linux
Support adapter trimming for single end data
use -s <adapter_sequence> to enable trimming for single end data
Support sliding window cutting by quality
v0.3.0 set version to v0.3.0