diff --git a/docs/Installation.rst b/docs/Installation.rst index e38e827..f373344 100644 --- a/docs/Installation.rst +++ b/docs/Installation.rst @@ -18,7 +18,7 @@ Conda install 4, Install scar:: - conda install -c bioconda scar + conda install bioconda::scar 5, Activate the scar conda environment:: diff --git a/scar-cpu.yml b/scar-cpu.yml index 8e135ac..28ca967 100644 --- a/scar-cpu.yml +++ b/scar-cpu.yml @@ -4,7 +4,7 @@ channels: - pytorch - conda-forge dependencies: -- conda-forge::python>=3.8.6 +- conda-forge::python>=3.10 - nvidia::cudatoolkit>=11.1 - pytorch::pytorch>=1.10.0 - pytorch::torchvision>=0.9.0 diff --git a/scar-gpu.yml b/scar-gpu.yml index c120384..e22ca86 100644 --- a/scar-gpu.yml +++ b/scar-gpu.yml @@ -4,7 +4,7 @@ channels: - pytorch - conda-forge dependencies: -- conda-forge::python>=3.8.6 +- conda-forge::python>=3.10 - nvidia::cudatoolkit>=11.1 - pytorch::pytorch>=1.10.0 - pytorch::torchvision>=0.9.0 diff --git a/setup.cfg b/setup.cfg index a96490a..640eec3 100644 --- a/setup.cfg +++ b/setup.cfg @@ -16,7 +16,7 @@ classifiers = [options] packages = find: -python_requires = >=3.8 +python_requires = >=3.10 zip_safe = False include_package_data = True install_requires = @@ -27,6 +27,8 @@ install_requires = seaborn >= 0.11.2 scikit-learn >= 1.0.1 pyro-ppl >= 1.8.0 + anndata + scanpy package_dir= =.