pyproject.toml

[build-system]
requires = ["setuptools>=68.1.2"]
build-backend = "setuptools.build_meta"

[project]
name = "scar"
version = "0.7.0"
requires-python = ">= 3.10"
dependencies = [
    "torch >= 1.10.0",
    "torchvision >= 0.9.0",
    "tqdm >= 4.62.3",
    "seaborn >= 0.11.2",
    "scikit-learn >= 1.0.1",
    "pyro-ppl >= 1.8.0",
    "scanpy >= 1.9.2"
]
authors = [
    {name = "Caibin Sheng", email = "caibin.sheng.res@gmail.com"}
]
description = "scAR (single-cell Ambient Remover) is a package for denoising the ambient signals in droplet-based single cell omics"
readme = "README.md"
license = {text = "MIT License"}
keywords = ["single cell omics", "variational autoencoder", "machine learning", "generative model", "cite-seq", "scCRISPRseq", "scRNAseq"]

[project.urls]
Homepage = "https://github.com/Novartis/scAR"
Documentation = "https://scar-tutorials.readthedocs.io/en/main/"
Repository = "https://github.com/Novartis/scar.git"
Issues = "https://github.com/Novartis/scAR/issues"
Changelog = "https://github.com/me/spam/blob/master/CHANGELOG.md"

[tool.semantic_release]
version_toml = ["pyproject.toml:project.version"]
major_on_zero = false
branch = "develop"
upload_to_release = false
hvcs = "github"
upload_to_repository = false
upload_to_pypi = false
patch_without_tag = false

[tool.semantic_release.changelog]
changelog_file="docs/Release_notes.md"

[project.gui-scripts]
scar = "scar.main.__main__:main"