analyzed_file_structure.txt

Each cell data contains multiple trials. Each trial has the structure diplayed below:

> data_index (dict)  
  |->hidden_state (array)
  |->input_current (array)
  |->input_generation_settings (dict)
      |-->baseline 
      |-->amplitude_scaling 
      |-->tau 
      |-->mean_firing_rate 
      |-->sampling_rate 
      |-->duration 
      |-->FLAG_convert_to_amphere 
      |-->condition 
      |-->experimentname 
      |-->experimentername 
      |-->experimentnr 
      |-->trialnr 
  |->membrane_potential (array)
  |->spikeindices (array)
  |->thresholds (array)
  |->thresholdindices (array)
  |->classification 
  |->classification/apwidth (dict)
      |-->ahpamp 
      |-->meanspike (dict)
        |-->v 
        |-->spikeindex
        |-->threshold
        |-->thresholdindex
        |-->apwidth
        |-->ahpamp
  |->firing_rate 
  |->mean_threshold
  |->Analysis
  |->sta (dict)
      |-->ic 
      |-->ic/raw
      |-->ic/cor
      |-->ic/correg
      |-->ic/priorPV
      |-->ic/STPV
      |-->ic/normalized_peakdistance
      |-->x
        |-->raw
        |-->cor
        |-->correg
        |-->priorPV
        |-->STPV
        |-->normalized_peakdistance
  |->Analysis_Settings (dict)
      |-->threshold
        |-->thresholdmethod
        |-->searchthreshold
        |-->thresholdwindow
        |-->refractory_period
        |-->derthreshold
      |-->MIanalysis (dict)
        |-->windowtype
        |-->windowsize
        |-->factor_ron_roff
      |-->staparams (dict)
        |-->ic (dict)
          |-->normalize
          |-->lambda_original
          |-->window
          |-->factor_downsampling
          |-->lambdaI
          |-->projection_whichsta
        |-->x (dict)
          |-->normalize
          |-->lambda_original
          |-->window
          |-->factor_downsampling
          |-->lambdaI
          |-->projection_whichsta
      |-->classification (dict)
        |-->window
        |-->stdwindow
        |-->minisi
      |-->saveindividualsettings
  |->normalized_trial (array)