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Welcome to the libNeuroML Wiki!

Tools relevant for this initiative

Neuronvisio

http://michelemattioni.me/neuronvisio/ https://github.com/mattions/neuronvisio

PyNN

http://neuralensemble.org/trac/PyNN

Morphforge

https://github.com/mikehulluk/morphforge

CATMAID

http://www.catmaid.org We reconstruct neuronal circuits (morphology in 3D, synaptic connectivity) as skeletons, surfaces, volumes in CATMAID. We want to be able to export the data into an object model (data format), complement it with ion channel distribution of several types & synaptic mechanisms, and simulate the membrane voltage time series and do virtual current injection etc. on standard simulators. All of this with a easy-to-use, intuitive Python API in a few lines of code.

NEURON

http://www.neuron.yale.edu/neuron/

MOOSE

http://moose.sourceforge.net/